RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
SUMO1-203ENST00000392246 ST6GALNAC4Q9H4F1 302 aa16.42■□□□□ 0.22
SUMO1-203ENST00000392246 TBC1D7Q9P0N9 293 aa16.42■□□□□ 0.22
SUMO1-203ENST00000392246 PIN4Q9Y237 131 aaKnown RBP16.42■□□□□ 0.22
SUMO1-203ENST00000392246 ENPP3O14638 875 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 KLRC4O43908 158 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 TSPAN1O60635 241 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
SUMO1-203ENST00000392246 STRN3Q13033 797 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 PRPF4BQ13523 1007 aaKnown RBP16.41■□□□□ 0.22
SUMO1-203ENST00000392246 DSC3Q14574 896 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 SHHQ15465 462 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 C9orf50Q5SZB4 431 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 PRPF38BQ5VTL8 546 aaKnown RBP16.41■□□□□ 0.22
SUMO1-203ENST00000392246 CHRDL2Q6WN34 429 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 ADAM2Q99965 735 aa16.41■□□□□ 0.22
SUMO1-203ENST00000392246 TSPYL2Q9H2G4 693 aaPredicted RBP16.41■□□□□ 0.22
SUMO1-203ENST00000392246 CNTNAP2Q9UHC6 1331 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 ZBBXA8MT70 800 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 MGEA5O60502 916 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 KCNJ6P48051 423 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 GTF2BQ00403 316 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 EHHADHQ08426 723 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 PNOCQ13519 176 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 ALCAMQ13740 583 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 KMT5BQ4FZB7 885 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 NOTUMQ6P988 496 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 TAS1R3Q7RTX0 852 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 RTN4RL1Q86UN2 441 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 PRO3102Q9H379 93 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 C1orf112Q9NSG2 853 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 TBX20Q9UMR3 447 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 PCDHB13Q9Y5F0 798 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 B4GALT5O43286 388 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 SMC2O95347 1197 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 GCNT3O95395 438 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 WDR5P61964 334 aaKnown RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 PSMD2Q13200 908 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 TMEM132AQ24JP5 1023 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 RASIP1Q5U651 963 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 TWF2Q6IBS0 349 aaKnown RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 HVCN1Q96D96 273 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 MRPL4Q9BYD3 311 aaKnown RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 CXXC1Q9P0U4 656 aaPredicted RBP16.4■□□□□ 0.22
SUMO1-203ENST00000392246 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
SUMO1-203ENST00000392246 TTC3P53804 2025 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 A0A1B0GUA9 196 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 PPP1R37O75864 691 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 MBD3O95983 291 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 AMHP03971 560 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 KCNB1Q14721 858 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 ZC2HC1CQ53FD0 456 aaPredicted RBP16.39■□□□□ 0.21
SUMO1-203ENST00000392246 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
SUMO1-203ENST00000392246 SLC24A5Q71RS6 500 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 TDHQ8IZJ6 230 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 GPT2Q8TD30 523 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 HPS3Q969F9 1004 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 TRAIPQ9BWF2 469 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
SUMO1-203ENST00000392246 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
SUMO1-203ENST00000392246 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 C9IYK1 514 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 N4BP3O15049 544 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 EDN1P05305 212 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 MYBP10242 640 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 SKIP12755 728 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 CASP5P51878 434 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 SPATA20Q8TB22 786 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 GSDMAQ96QA5 445 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 ACO2Q99798 780 aaKnown RBP16.38■□□□□ 0.21
SUMO1-203ENST00000392246 TARS2Q9BW92 718 aaKnown RBP16.38■□□□□ 0.21
SUMO1-203ENST00000392246 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 SLC39A2Q9NP94 309 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 USP20Q9Y2K6 914 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
SUMO1-203ENST00000392246 A0A0U1RQF3 1178 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 EIF3DO15371 548 aaKnown RBP eCLIP16.37■□□□□ 0.21
SUMO1-203ENST00000392246 PTMSP20962 102 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
SUMO1-203ENST00000392246 FAM189BP81408 668 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 DEFB103AP81534 67 aa16.37■□□□□ 0.21
SUMO1-203ENST00000392246 CAMK4Q16566 473 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms