RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 MAGEF1Q9HAY2 307 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 RC3H2Q9HBD1 1191 aaKnown RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 PARVGQ9HBI0 331 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 ARHGAP28Q9P2N2 729 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 CNTNAP2Q9UHC6 1331 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 TCHHQ07283 1943 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 MYH11P35749 1972 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 K7ERI5 159 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 ACKR2O00590 384 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 POLR2DO15514 142 aaKnown RBP16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 LIG1P18858 919 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 CMA1P23946 247 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 ZNF131P52739 623 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 AMPD3Q01432 767 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 TAP1Q03518 808 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 PRPF4BQ13523 1007 aaKnown RBP16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 BTG3Q14201 252 aaPredicted RBP16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 E2F4Q16254 413 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 Q7L0L9 218 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 ABI1Q8IZP0 508 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 RNF169Q8NCN4 708 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 DDX12PQ92771 950 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 CPB2Q96IY4 423 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 NTPCRQ9BSD7 190 aaKnown RBP16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 SEMA6BQ9H3T3 888 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 ZHX3Q9H4I2 956 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
IGHV3-53-201ENST00000390627 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 MYMKA6NI61 221 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 N4BP3O15049 544 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 SLC16A4O15374 487 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 B4GALT5O43286 388 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 ZNF623O75123 536 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 SCP2P22307 547 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 ZNF598Q86UK7 904 aaKnown RBP16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 MYCT1Q8N699 235 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 PGBD4Q96DM1 585 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 FAM161BQ96MY7 647 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 GDPD2Q9HCC8 539 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 PCDHB2Q9Y5E7 798 aa16.56■□□□□ 0.24
IGHV3-53-201ENST00000390627 A0A1B0GUA9 196 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 ARHGEF15O94989 841 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 FGFR1P11362 822 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 PFKFB1P16118 471 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 ATF7P17544 494 aaPredicted RBP16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 ABCD1P33897 745 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 STRN3Q13033 797 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 PAN2Q504Q3 1202 aaKnown RBP16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 UBXN11Q5T124 520 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 APBB1IPQ7Z5R6 666 aaPredicted RBP16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 HACE1Q8IYU2 909 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 CEP57L1Q8IYX8 460 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 SLC17A8Q8NDX2 589 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 ADPGKQ9BRR6 497 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 MRPL4Q9BYD3 311 aaKnown RBP16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 TMEM117Q9H0C3 514 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 MTMR10Q9NXD2 777 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 SEL1LQ9UBV2 794 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
IGHV3-53-201ENST00000390627 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 TBKBP1A7MCY6 615 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 K7ENM7 598 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 TRAK2O60296 914 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 GAP43P17677 238 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 GATMP50440 423 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 ERVK-21P61565 698 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 FAM178BQ8IXR5 827 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 KCNN1Q92952 543 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 USP25Q9UHP3 1055 aa16.54■□□□□ 0.24
IGHV3-53-201ENST00000390627 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 NPTXRO95502 500 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 MAPTP10636 758 aaKnown RBP16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 IDEP14735 1019 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 SYKP43405 635 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 CLLU1OSQ5K130 101 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 ATF7IP2Q5U623 682 aa16.53■□□□□ 0.24
IGHV3-53-201ENST00000390627 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms