RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 THAP2Q9H0W7 228 aa16.18■□□□□ 0.18
SCFD2-201ENST00000388940 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
SCFD2-201ENST00000388940 PXMP2Q9NR77 195 aa16.18■□□□□ 0.18
SCFD2-201ENST00000388940 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
SCFD2-201ENST00000388940 BACH1O14867 736 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 ABCB4P21439 1286 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 POU5F1Q01860 360 aaKnown RBP16.17■□□□□ 0.18
SCFD2-201ENST00000388940 PTPROQ16827 1216 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 PLEKHO2Q8TD55 490 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 LRRC45Q96CN5 670 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 NAP1L3Q99457 506 aaPredicted RBP16.17■□□□□ 0.18
SCFD2-201ENST00000388940 SENP7Q9BQF6 1050 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 DDX47Q9H0S4 455 aaKnown RBP16.17■□□□□ 0.18
SCFD2-201ENST00000388940 ATP9AO75110 1047 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 ITGA4P13612 1032 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 VCAM1P19320 739 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 GCLMP48507 274 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 C11orf63Q6NUN7 778 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 SRLQ86TD4 932 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 PALB2Q86YC2 1186 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 TRERF1Q96PN7 1200 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
SCFD2-201ENST00000388940 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
SCFD2-201ENST00000388940 SLC16A4O15374 487 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 LRRN2O75325 713 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 CCNE2O96020 404 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 KRT14P02533 472 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 MXI1P50539 228 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 PEX3P56589 373 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCFD2-201ENST00000388940 FOXR1Q6PIV2 292 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 NTPCRQ9BSD7 190 aaKnown RBP16.16■□□□□ 0.18
SCFD2-201ENST00000388940 FAM114A2Q9NRY5 505 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 HOMER2Q9NSB8 354 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 COG5Q9UP83 839 aa16.16■□□□□ 0.18
SCFD2-201ENST00000388940 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
SCFD2-201ENST00000388940 MIF4GDA9UHW6 222 aaKnown RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 MAFGO15525 162 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 RTN2O75298 545 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 MTA2O94776 668 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 FGGP02679 453 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 GZMAP12544 262 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 SMTNP53814 917 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 XKR9Q5GH70 373 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 KDM7AQ6ZMT4 941 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 TMEM161BQ8NDZ6 487 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 C17orf75Q9HAS0 396 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 SEPT11Q9NVA2 429 aaKnown RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 AMACRQ9UHK6 382 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 TCEAL9Q9UHQ7 104 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 TBX20Q9UMR3 447 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 COQ4Q9Y3A0 265 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 DOCK1Q14185 1865 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 EIF3HO15372 352 aaKnown RBP eCLIP16.15■□□□□ 0.188e-6■□□□□ 10.6
SCFD2-201ENST00000388940 FTLP02792 175 aaPredicted RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 PTENP60484 403 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 GPC5P78333 572 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 ENPEPQ07075 957 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 MAP4K3Q8IVH8 894 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 SPIRE2Q8WWL2 714 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 GPRASP2Q96D09 838 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 PLAAQ9Y263 795 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 RRP15Q9Y3B9 282 aaKnown RBP16.15■□□□□ 0.18
SCFD2-201ENST00000388940 GRIN2DO15399 1336 aa16.15■□□□□ 0.18
SCFD2-201ENST00000388940 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 VWA5AO00534 786 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ADRB2P07550 413 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 FAM102BQ5T8I3 360 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 VSIG10LQ86VR7 867 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ZSWIM2Q8NEG5 633 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 NOCTQ9UK39 431 aaKnown RBP16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ALG6Q9Y672 507 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ARID2Q68CP9 1835 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 RLFQ13129 1914 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 KIAA1217Q5T5P2 1943 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 TMEM150BA6NC51 233 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 CHRNB2P17787 502 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 ADSSP30520 456 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 HSD17B3P37058 310 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 NPTX2P47972 431 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 MFAP3P55082 362 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 DGKZQ13574 1117 aa16.14■□□□□ 0.17
SCFD2-201ENST00000388940 MTMR2Q13614 643 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms