RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 WNK4Q96J92 1243 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 SLC6A20Q9NP91 592 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 FAM86C1Q9NVL1 165 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 ARHGAP28Q9P2N2 729 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 NCDNQ9UBB6 729 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 WWC3Q9ULE0 1092 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 VWA7Q9Y334 891 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
RNU6-540P-201ENST00000384622 CYP2D7A0A087X1C5 515 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 SMIM35A0A1B0GVV1 85 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZBTB7CA1YPR0 619 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 STC2O76061 302 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZSCAN20P17040 1043 aaPredicted RBP0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ARHGAP25P42331 645 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 PMS1P54277 932 aaKnown RBP0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 NHLH2Q02577 135 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 DBPQ10586 325 aaPredicted RBP0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 TCIRG1Q13488 830 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 MOGSQ13724 837 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 RAB33AQ14088 237 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 SPIDRQ14159 915 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 GAGE13Q4V321 117 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 PDCD4Q53EL6 469 aaKnown RBP0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 DAB2IPQ5VWQ8 1189 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZDHHC20Q5W0Z9 365 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 GRAMD4Q6IC98 578 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZNF449Q6P9G9 518 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 CLEC14AQ86T13 490 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 HAPLN4Q86UW8 402 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 COPS5Q92905 334 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 RNF34Q969K3 372 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 SLC9A7Q96T83 725 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 PYGO2Q9BRQ0 406 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 TMEM204Q9BSN7 226 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 LCE3DQ9BYE3 92 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 CDCP1Q9H5V8 836 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 C12orf49Q9H741 205 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 CLDND1Q9NY35 253 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADAM21Q9UKJ8 722 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 PADI4Q9UM07 663 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 DMTF1Q9Y222 760 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 EFR3BQ9Y2G0 817 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 FPGT-TNNI3KV9GXZ4 949 aa0.37□□□□□ -2.35
RNU6-540P-201ENST00000384622 A0A0B4J293 547 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 LY6G6EA0A0G2JKS1 128 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 CCDC151A5D8V7 595 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 C2orf78A6NCI8 922 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 LDB3O75112 727 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 NGFRP08138 427 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 SSFA2P28290 1259 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 COMPP49747 757 aaPredicted RBP0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 TRA2BP62995 288 aaKnown RBP0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 LSAMPQ13449 338 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 CAMK2GQ13555 558 aaPredicted RBP0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 MPP2Q14168 576 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 STILQ15468 1287 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 KIF26BQ2KJY2 2108 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 TRIM71Q2Q1W2 868 aaKnown RBP0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 SPDYE7PQ495Y7 208 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 KLHDC10Q6PID8 442 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 DGLUCYQ7Z3D6 616 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 FAM83AQ86UY5 434 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 KIAA0825Q8IV33 1275 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 OR52N2Q8NGI0 321 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 PIP4K2CQ8TBX8 421 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 PIGOQ8TEQ8 1089 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 RNF31Q96EP0 1072 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZNF479Q96JC4 524 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 CAMK1GQ96NX5 476 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 CPEB1Q9BZB8 566 aaKnown RBP0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 EPC1Q9H2F5 836 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 INCENPQ9NQS7 918 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 POT1Q9NUX5 634 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 FBXL7Q9UJT9 491 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 NUB1Q9Y5A7 615 aa0.36□□□□□ -2.35
RNU6-540P-201ENST00000384622 MARCH11A6NNE9 402 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 SYT5O00445 386 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ICMTO60725 284 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 DNAJC6O75061 913 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ATE1O95260 518 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ATG7O95352 703 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 SREBF1P36956 1147 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 SESN2P58004 480 aaPredicted RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ARHGAP4P98171 946 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 DAZAP2Q15038 168 aaPredicted RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 RBMS2Q15434 407 aaKnown RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 TCEA2Q15560 299 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ENOX2Q16206 610 aaKnown RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 KIZQ2M2Z5 673 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 FAM214AQ32MH5 1076 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ZNF618Q5T7W0 954 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 ADAT2Q7Z6V5 191 aaKnown RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 GLYCTKQ8IVS8 523 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 MSL3Q8N5Y2 521 aaKnown RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 PHC3Q8NDX5 983 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 C16orf52Q8NHV5 167 aa0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 GFM2Q969S9 779 aaKnown RBP0.35□□□□□ -2.35
RNU6-540P-201ENST00000384622 PDCD2LQ9BRP1 358 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms