RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 APOA5Q6Q788 366 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 AGMOQ6ZNB7 445 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 SPATA31D4Q6ZUB0 917 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 GET4Q7L5D6 327 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-203ENST00000380748 ZNF713Q8N859 430 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-203ENST00000380748 HERC2P3Q9BVR0 1158 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 SLC2A4RGQ9NR83 387 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
HMGN1-203ENST00000380748 MARCH5Q9NX47 278 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 FAN1Q9Y2M0 1017 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 NUMBLQ9Y6R0 609 aa19.53■□□□□ 0.72
HMGN1-203ENST00000380748 TMEM150BA6NC51 233 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 ANHXE9PGG2 379 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 NRP1O14786 923 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 LENG9Q96B70 501 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 SH2D3AQ9BRG2 576 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 TMEM175Q9BSA9 504 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 PRG3Q9Y2Y8 225 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-203ENST00000380748 PCDHB2Q9Y5E7 798 aa19.52■□□□□ 0.72
HMGN1-203ENST00000380748 PATJQ8NI35 1801 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 SLC27A2O14975 620 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 CHMP2AO43633 222 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 POMCP01189 267 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 ALDH2P05091 517 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 STARD6P59095 220 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 RTN1Q16799 776 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 MTERF2Q49AM1 385 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 ELMSAN1Q6PJG2 1045 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 CATSPER4Q7RTX7 472 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 PGBD4Q96DM1 585 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 FAM193BQ96PV7 902 aaPredicted RBP19.51■□□□□ 0.71
HMGN1-203ENST00000380748 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 RPP25Q9BUL9 199 aaKnown RBP19.51■□□□□ 0.71
HMGN1-203ENST00000380748 PIDD1Q9HB75 910 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 SPATA6Q9NWH7 488 aaPredicted RBP19.51■□□□□ 0.71
HMGN1-203ENST00000380748 SEPT9Q9UHD8 586 aaPredicted RBP19.51■□□□□ 0.71
HMGN1-203ENST00000380748 DPP7Q9UHL4 492 aa19.51■□□□□ 0.71
HMGN1-203ENST00000380748 SPTLC1O15269 473 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 GLUD2P49448 558 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 GPC5P78333 572 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 CDC42EP1Q00587 391 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 ZNF528Q3MIS6 628 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 ZNF410Q86VK4 478 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 RHPN2Q8IUC4 686 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 KSR1Q8IVT5 923 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 EXOC6Q8TAG9 804 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 INO80BQ9C086 356 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-203ENST00000380748 NT5C3AQ9H0P0 336 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 RSAD1Q9HA92 442 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 RXFP1Q9HBX9 757 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.5■□□□□ 0.71
HMGN1-203ENST00000380748 SUCLA2Q9P2R7 463 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-203ENST00000380748 BRPF3Q9ULD4 1205 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 MTF2Q9Y483 593 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-203ENST00000380748 MYH15Q9Y2K3 1946 aa19.5■□□□□ 0.71
HMGN1-203ENST00000380748 IGKV6-21A0A0C4DH24 114 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 LAMTOR5O43504 91 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 PAPLNO95428 1278 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 SDHBP21912 280 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 SNW1Q13573 536 aaKnown RBP19.49■□□□□ 0.71
HMGN1-203ENST00000380748 ST3GAL2Q16842 350 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 KIAA0319Q5VV43 1072 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 PALB2Q86YC2 1186 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 RNF168Q8IYW5 571 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-203ENST00000380748 GJA10Q969M2 543 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 NLRP4Q96MN2 994 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 LSG1Q9H089 658 aaKnown RBP19.49■□□□□ 0.71
HMGN1-203ENST00000380748 UNC45AQ9H3U1 944 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 FBXO4Q9UKT5 387 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 CDV3Q9UKY7 258 aaKnown RBP19.49■□□□□ 0.71
HMGN1-203ENST00000380748 SSX2IPQ9Y2D8 614 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 DOCK6Q96HP0 2047 aa19.49■□□□□ 0.71
HMGN1-203ENST00000380748 DCDC2BA2VCK2 349 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 F8W810 466 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 MSH4O15457 936 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 ZBTB43O43298 467 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 STBD1O95210 358 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 EFEMP2O95967 443 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 CIITAP33076 1130 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 DNM2P50570 870 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 CSTF1Q05048 431 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 CREB3L3Q68CJ9 461 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 MRPL10Q7Z7H8 261 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 GPR161Q8N6U8 529 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 FGF14Q92915 247 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 SHDQ96IW2 340 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 TCEANC2Q96MN5 208 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 BCO2Q9BYV7 579 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 FAM217BQ9NTX9 383 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 AGPAT5Q9NUQ2 364 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 KANSL3Q9P2N6 904 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 SMG5Q9UPR3 1016 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 PCDHGA2Q9Y5H1 932 aa19.48■□□□□ 0.71
HMGN1-203ENST00000380748 MTCL1Q9Y4B5 1905 aaKnown RBP19.48■□□□□ 0.71
HMGN1-203ENST00000380748 KANSL1LA0AUZ9 987 aa19.47■□□□□ 0.71
HMGN1-203ENST00000380748 TGM5O43548 720 aa19.47■□□□□ 0.71
HMGN1-203ENST00000380748 CDC27P30260 824 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms