RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 SYNGAP1Q96PV0 1343 aa27.13■■□□□ 1.93
NDEL1-202ENST00000380025 H2AFZP0C0S5 128 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 H2AFVQ71UI9 128 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 ARHGEF19Q8IW93 802 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 PROCA1Q8NCQ7 364 aaPredicted RBP27.12■■□□□ 1.93
NDEL1-202ENST00000380025 OTUD5Q96G74 571 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 UBXN6Q9BZV1 441 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 SPATC1LQ9H0A9 340 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 TMEM117Q9H0C3 514 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 PMM2O15305 246 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 ATP4AP20648 1035 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 CCDC181Q5TID7 509 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 SEPT14Q6ZU15 432 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 GLYCTKQ8IVS8 523 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 CLMNQ96JQ2 1002 aa27.12■■□□□ 1.93
NDEL1-202ENST00000380025 FOXN3O00409 490 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-202ENST00000380025 MXI1P50539 228 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 PPATQ06203 517 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 KIF22Q14807 665 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 MTERF2Q49AM1 385 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 POLR3FQ9H1D9 316 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-202ENST00000380025 SUGCTQ9HAC7 445 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 UBE2TQ9NPD8 197 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-202ENST00000380025 PRDM10Q9NQV6 1147 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 PACSIN2Q9UNF0 486 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-202ENST00000380025 MAFBQ9Y5Q3 323 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-202ENST00000380025 LRRC37A2A6NM11 1700 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 CCDC172P0C7W6 258 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 LRRC57Q8N9N7 239 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 ZNF302Q9NR11 478 aa27.11■■□□□ 1.93
NDEL1-202ENST00000380025 SOWAHBA6NEL2 793 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 EDNRBP24530 442 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 IFI16Q16666 785 aaKnown RBP27.1■■□□□ 1.93
NDEL1-202ENST00000380025 TAS1R3Q7RTX0 852 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 MS4A14Q96JA4 679 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 FBXL18Q96ME1 805 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 USP20Q9Y2K6 914 aa27.1■■□□□ 1.93
NDEL1-202ENST00000380025 A0A0A6YYK5 440 aaPredicted RBP27.09■■□□□ 1.93
NDEL1-202ENST00000380025 PAFAH1B1P43034 410 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 NCAPG2Q86XI2 1143 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 ARHGAP28Q9P2N2 729 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 UBA1P22314 1058 aaKnown RBP27.09■■□□□ 1.93
NDEL1-202ENST00000380025 MCM3P25205 808 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 NOP2P46087 812 aaKnown RBP27.09■■□□□ 1.93
NDEL1-202ENST00000380025 GALCP54803 685 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 IRX3P78415 501 aaPredicted RBP27.09■■□□□ 1.93
NDEL1-202ENST00000380025 EMC2Q15006 297 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 HDXQ7Z353 690 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 ERO1BQ86YB8 467 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 PARD3BQ8TEW8 1205 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 RNF14Q9UBS8 474 aa27.09■■□□□ 1.93
NDEL1-202ENST00000380025 CNMDO75829 334 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 OATP04181 439 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 DNA2P51530 1060 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 MOB2Q70IA6 237 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 TPCN2Q8NHX9 752 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 IFT74Q96LB3 600 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 ASCC2Q9H1I8 757 aaPredicted RBP27.08■■□□□ 1.93
NDEL1-202ENST00000380025 IGKV6D-21A0A0A0MT36 114 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 LRRIQ3A6PVS8 624 aaPredicted RBP27.08■■□□□ 1.93
NDEL1-202ENST00000380025 CFAP221Q4G0U5 840 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 POMGNT1Q8WZA1 660 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 VTI1AQ96AJ9 217 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 CCDC127Q96BQ5 260 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 MFSD14AQ96MC6 490 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 PAGR1Q9BTK6 254 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 GOLPH3Q9H4A6 298 aa27.08■■□□□ 1.93
NDEL1-202ENST00000380025 HNRNPDLO14979 420 aaKnown RBP27.07■■□□□ 1.92
NDEL1-202ENST00000380025 POLGP54098 1239 aaPredicted RBP27.07■■□□□ 1.92
NDEL1-202ENST00000380025 MAP2K1Q02750 393 aaPredicted RBP27.07■■□□□ 1.92
NDEL1-202ENST00000380025 BRDTQ58F21 947 aaPredicted RBP27.07■■□□□ 1.92
NDEL1-202ENST00000380025 ANKRD13AQ8IZ07 590 aa27.07■■□□□ 1.92
NDEL1-202ENST00000380025 R3HDMLQ9H3Y0 253 aa27.07■■□□□ 1.92
NDEL1-202ENST00000380025 SPDYE5A6NIY4 337 aa27.07■■□□□ 1.92
NDEL1-202ENST00000380025 GABPB1Q06547 395 aaPredicted RBP27.07■■□□□ 1.92
NDEL1-202ENST00000380025 CDCA5Q96FF9 252 aa27.07■■□□□ 1.92
NDEL1-202ENST00000380025 LRRC1Q9BTT6 524 aa27.07■■□□□ 1.92
NDEL1-202ENST00000380025 CXCL11O14625 94 aa27.06■■□□□ 1.92
NDEL1-202ENST00000380025 ZMYND10O75800 440 aa27.06■■□□□ 1.92
NDEL1-202ENST00000380025 FARP2O94887 1054 aaPredicted RBP27.06■■□□□ 1.92
NDEL1-202ENST00000380025 MATR3P43243 847 aaKnown RBP eCLIP27.06■■□□□ 1.921e-6■■■□□ 18.7
NDEL1-202ENST00000380025 SMC1AQ14683 1233 aaKnown RBP27.06■■□□□ 1.92
NDEL1-202ENST00000380025 TMC2Q8TDI7 906 aa27.06■■□□□ 1.92
NDEL1-202ENST00000380025 SEMA4DQ92854 862 aa27.06■■□□□ 1.92
NDEL1-202ENST00000380025 KAT5Q92993 513 aa27.06■■□□□ 1.92
NDEL1-202ENST00000380025 POP1Q99575 1024 aaKnown RBP27.06■■□□□ 1.92
NDEL1-202ENST00000380025 RBM12Q9NTZ6 932 aaKnown RBP27.06■■□□□ 1.92
NDEL1-202ENST00000380025 NCANO14594 1321 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 TMCO5BA8MYB1 307 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 TNFAIP3P21580 790 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 GARTP22102 1010 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 CYP24A1Q07973 514 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 C9orf131Q5VYM1 1079 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 KRT39Q6A163 491 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 CCDC70Q6NSX1 233 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 SLFN11Q7Z7L1 901 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 PALB2Q86YC2 1186 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 CEP89Q96ST8 783 aa27.05■■□□□ 1.92
NDEL1-202ENST00000380025 DHX33Q9H6R0 707 aaKnown RBP27.05■■□□□ 1.92
NDEL1-202ENST00000380025 TMEM8AQ9HCN3 771 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms