RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SLC39A11Q8N1S5 342 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 CCDC51Q96ER9 411 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 FAM193BQ96PV7 902 aaPredicted RBP27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 TRIM6Q9C030 488 aaPredicted RBP27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 GBP3Q9H0R5 595 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 RSAD1Q9HA92 442 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 NGRNQ9NPE2 291 aaKnown RBP27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 LRWD1Q9UFC0 647 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 LRRIQ4A6NIV6 560 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 PER2O15055 1255 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 TSPAN1O60635 241 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 GLRA2P23416 452 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 GJB2P29033 226 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 FXR2P51116 673 aaKnown RBP eCLIP27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 PTGDRQ13258 359 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 SMAD4Q13485 552 aaKnown RBP27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 GJD3Q8N144 294 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 CPB2Q96IY4 423 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 TBC1D32Q96NH3 1257 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 TBC1D13Q9NVG8 400 aa27.36■■□□□ 1.97
TNFRSF4-201ENST00000379236 MEIS3P2A8K0S8 358 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 NT5C1B-RDH14C9J2C7 533 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 FSCN2O14926 492 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 OFD1O75665 1012 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 ITGA4P13612 1032 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 MUTP22033 750 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 HOXA11P31270 313 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 IFNLR1Q8IU57 520 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 ZBTB8OSQ8IWT0 167 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 HACE1Q8IYU2 909 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 UBN1Q9NPG3 1134 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 PRKAG3Q9UGI9 489 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 SMC3Q9UQE7 1217 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 PCDHB6Q9Y5E3 794 aa27.35■■□□□ 1.97
TNFRSF4-201ENST00000379236 LAD1O00515 517 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 MBTPS2O43462 519 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 MBTD1Q05BQ5 628 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 SMC1AQ14683 1233 aaKnown RBP27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 DUSP6Q16828 381 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 PADI6Q6TGC4 694 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 MRPL10Q7Z7H8 261 aaKnown RBP27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 TMEM87AQ8NBN3 555 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 NFKBIZQ9BYH8 718 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 GPRC5CQ9NQ84 441 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 KANSL3Q9P2N6 904 aa27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 BARX2Q9UMQ3 279 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF4-201ENST00000379236 NCLP19338 710 aaKnown RBP27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 TMEM132AQ24JP5 1023 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 RILPL1Q5EBL4 403 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 UBXN11Q5T124 520 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 AGMOQ6ZNB7 445 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 SNX29Q8TEQ0 813 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 POP1Q99575 1024 aaKnown RBP27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 C1QTNF1Q9BXJ1 281 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 CSRNP2Q9H175 543 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 NRDE2Q9H7Z3 1164 aa27.33■■□□□ 1.97
TNFRSF4-201ENST00000379236 CD2BP2O95400 341 aaKnown RBP27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 TOB1P50616 345 aaPredicted RBP27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 PDIA5Q14554 519 aa27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 DTHD1Q6ZMT9 781 aa27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 C4orf32Q8N8J7 132 aa27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 C2orf40Q9H1Z8 148 aa27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 IPPQ9Y573 584 aa27.32■■□□□ 1.96
TNFRSF4-201ENST00000379236 SMAD2Q15796 467 aaKnown RBP27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 KRT79Q5XKE5 535 aa27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 MSLNLQ96KJ4 702 aa27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 APOL6Q9BWW8 343 aa27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 EIF2AQ9BY44 585 aaKnown RBP27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 PRMT7Q9NVM4 692 aaPredicted RBP27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 CLEC1BQ9P126 229 aa27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 KIAA1024Q9UPX6 916 aa27.31■■□□□ 1.96
TNFRSF4-201ENST00000379236 GLP2RO95838 553 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 ARF4P18085 180 aaPredicted RBP27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 CYP11B2P19099 503 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 PPP2R5AQ15172 486 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 LLGL2Q6P1M3 1020 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 ADHFE1Q8IWW8 467 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 DEPTORQ8TB45 409 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 DDX19AQ9NUU7 478 aaKnown RBP27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 C5orf42Q9H799 3197 aa27.3■■□□□ 1.96
TNFRSF4-201ENST00000379236 MYH11P35749 1972 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 HIDE1A8MVS5 230 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 POMCP01189 267 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 GALTP07902 379 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 PRPHP41219 470 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 COASYQ13057 564 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 SLC27A1Q6PCB7 646 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 VPS52Q8N1B4 723 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 IGSF22Q8N9C0 903 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 SMG8Q8ND04 991 aaKnown RBP27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 IGSF21Q96ID5 467 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 IFT74Q96LB3 600 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 PRIMPOLQ96LW4 560 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 BHMT2Q9H2M3 363 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 CD320Q9NPF0 282 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 DNAJB4Q9UDY4 337 aa27.29■■□□□ 1.96
TNFRSF4-201ENST00000379236 B4GALT5O43286 388 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 NPTXRO95502 500 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms