RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 STAMQ92783 540 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 KCNN1Q92952 543 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 FZD8Q9H461 694 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 PVALEFA0A1B0GWK0 134 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ACKR2O00590 384 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ENPP3O14638 875 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 PRKCBP05771 671 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 FGFR4P22455 802 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 AFMP43652 599 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ASIC1P78348 528 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 STRN3Q13033 797 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 DSC3Q14574 896 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 TCTN1Q2MV58 587 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ADAM2Q99965 735 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 TRAIPQ9BWF2 469 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 ST6GALNAC4Q9H4F1 302 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 CNTNAP2Q9UHC6 1331 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 SLC16A4O15374 487 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 TSPAN1O60635 241 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 RAB27AP51159 221 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 ALCAMQ13740 583 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 AMHR2Q16671 573 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
PCNA-201ENST00000379143 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
PCNA-201ENST00000379143 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 A0A0U1RQF3 1178 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 C9IYK1 514 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 K7ENM7 598 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 GTPBP6O43824 516 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 MGEA5O60502 916 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 ARF4P18085 180 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 HOXA11P31270 313 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 FAM189BP81408 668 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■■■■■ 32.5
PCNA-201ENST00000379143 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 NPAS4Q8IUM7 802 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 ELOA2Q8IYF1 753 aaPredicted RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 LINC01599Q8WXQ3 324 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 CCDC47Q96A33 483 aaKnown RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 MRPL44Q9H9J2 332 aaKnown RBP13.11□□□□□ -0.31
PCNA-201ENST00000379143 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
PCNA-201ENST00000379143 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 N4BP3O15049 544 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 NR1I2O75469 434 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 EOMESO95936 686 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 LIG1P18858 919 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 DEFB103AP81534 67 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 GTF2BQ00403 316 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 COASYQ13057 564 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 CUL4BQ13620 913 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 ZPBP2Q6X784 338 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 ZNF720Q7Z2F6 126 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
PCNA-201ENST00000379143 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms