RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GH1P01241 217 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 TCF7P36402 384 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 HERVK_113P62684 666 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 TNFAIP2Q03169 654 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 HAS1Q92839 578 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 P2RX7Q99572 595 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 TRIM10Q9UDY6 481 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 TBC1D8O95759 1140 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 BMP6P22004 513 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SGO2Q562F6 1265 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SAMD3Q8N6K7 520 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 PACSIN2Q9UNF0 486 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 COMMD10Q9Y6G5 202 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SSU72P8A0A1W2PR75 194 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SLITRK3O94933 977 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 FGGP02679 453 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 MDM2Q00987 491 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 PGM5Q15124 567 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SLC18A3Q16572 532 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 SH3BP5LQ7L8J4 393 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 CCDC63Q8NA47 563 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 STK33Q9BYT3 514 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 AGO4Q9HCK5 861 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 NKIRAS1Q9NYS0 192 aa15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-203ENST00000378679 ZBTB39O15060 712 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 TBC1D12O60347 775 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 EVI5O60447 810 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 STK10O94804 968 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 ABL1P00519 1130 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 OATP04181 439 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 IL17AQ16552 155 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 PPP1R2P3Q6NXS1 205 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 PPM1EQ8WY54 764 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 RANBP17Q9H2T7 1088 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 CYP26B1Q9NR63 512 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 LRRD1A4D1F6 860 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 RFX1P22670 979 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 TEX2Q8IWB9 1127 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 BCAS4Q8TDM0 211 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 GRK7Q8WTQ7 553 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 TNFRSF25Q93038 417 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 GCOM2Q9BZD3 368 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 MAP7D3Q8IWC1 876 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 CALN1Q9BXU9 219 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 PASKQ96RG2 1323 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 IGSF9BQ9UPX0 1349 aa15.22■□□□□ 0.03
SHROOM1-203ENST00000378679 KLRG2A4D1S0 409 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 PLTPP55058 493 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CNTN2Q02246 1040 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CASC4Q6P4E1 433 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 TRIM50Q86XT4 487 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 NSRP1Q9H0G5 558 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 PLAGL2Q9UPG8 496 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 ROBO3Q96MS0 1386 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 ATP1A1P05023 1023 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 C6orf222P0C671 652 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 SNHG28P0DPA3 235 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 MUTP22033 750 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 TBXAS1P24557 533 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 DGKZQ13574 1117 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 VGLL4Q14135 290 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 ZNF720Q7Z2F6 126 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 VPS37BQ9H9H4 285 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CXCL11O14625 94 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 RFC5P40937 340 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 RARRES1P49788 294 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 RWDD2BP57060 319 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 CAPN12Q6ZSI9 719 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 ENOSF1Q7L5Y1 443 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 LRRC4Q9HBW1 653 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 GBA2Q9HCG7 927 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
SHROOM1-203ENST00000378679 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 ALS2Q96Q42 1657 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 AKAP3O75969 853 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 GNA15P30679 374 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 NPTX2P47972 431 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 WDR72Q3MJ13 1102 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 GTF3C2Q8WUA4 911 aaPredicted RBP15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 OSBPL9Q96SU4 736 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 TFR2Q9UP52 801 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 CAPN7Q9Y6W3 813 aa15.21■□□□□ 0.02
SHROOM1-203ENST00000378679 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms