RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CYP4X1Q8N118 509 aa17.06■□□□□ 0.32
CKAP4-201ENST00000378026 CKAP2Q8WWK9 683 aa17.06■□□□□ 0.32
CKAP4-201ENST00000378026 MYLK2Q9H1R3 596 aa17.06■□□□□ 0.32
CKAP4-201ENST00000378026 NHSL1Q5SYE7 1610 aa17.06■□□□□ 0.32
CKAP4-201ENST00000378026 ESYT2A0FGR8 921 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 PODXLO00592 558 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 BAG3O95817 575 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 DRG2P55039 364 aaKnown RBP17.05■□□□□ 0.32
CKAP4-201ENST00000378026 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 SLC20A1Q8WUM9 679 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 C1orf54Q8WWF1 131 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 PITPNM3Q9BZ71 974 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 TRAF3IP3Q9Y228 551 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
CKAP4-201ENST00000378026 UNC5CO95185 931 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 NEFHP12036 1026 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 SEL1L2Q5TEA6 688 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 LONP2Q86WA8 852 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 UBL4BQ8N7F7 174 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 OLIG1Q8TAK6 271 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 RIOX1Q9H6W3 641 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 ETAA1Q9NY74 926 aa17.05■□□□□ 0.32
CKAP4-201ENST00000378026 LRRD1A4D1F6 860 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 GM2AP17900 193 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 COMTP21964 271 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 COG2Q14746 738 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 CATSPER3Q86XQ3 398 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 TTC8Q8TAM2 541 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 ASTN1O14525 1302 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 NCANO14594 1321 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 FTLP02792 175 aaPredicted RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 KCNQ4P56696 695 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 TNFAIP8L3Q5GJ75 292 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 PRUNE1Q86TP1 453 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 RAB3IPQ96QF0 476 aaPredicted RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 ADAM33Q9BZ11 813 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 PAPOLBQ9NRJ5 636 aaKnown RBP17.04■□□□□ 0.32
CKAP4-201ENST00000378026 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 PCDHA3Q9Y5H8 950 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
CKAP4-201ENST00000378026 KIAA1551Q9HCM1 1747 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 O00370 1275 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PECAM1P16284 738 aaPredicted RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 RPL13P26373 211 aaKnown RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 CYP2J2P51589 502 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 CBWD6Q4V339 395 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 CBWD3Q5JTY5 395 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 CBWD5Q5RIA9 395 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 SUPT20HQ8NEM7 779 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PIGOQ8TEQ8 1089 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 ART4Q93070 314 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 RUNDC3BQ96NL0 473 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 SYT15Q9BQS2 421 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PSTPIP2Q9H939 334 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PDXKO00764 312 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 SPAG7O75391 227 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PAPOLAP51003 745 aaKnown RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 DNAJC3Q13217 504 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 LMNTD2Q8IXW0 634 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 TMEM109Q9BVC6 243 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 STK33Q9BYT3 514 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 RNPEPL1Q9HAU8 725 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 METTL14Q9HCE5 456 aaKnown RBP17.03■□□□□ 0.32
CKAP4-201ENST00000378026 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PCYOX1Q9UHG3 505 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
CKAP4-201ENST00000378026 ANKRD62A6NC57 917 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 FOXN3O00409 490 aaPredicted RBP17.02■□□□□ 0.32
CKAP4-201ENST00000378026 SPOPO43791 374 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 ENTPD5O75356 428 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 CALB2P22676 271 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 EPHB2P29323 1055 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 FOXN2P32314 431 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 ITPK1Q13572 414 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 MFSD5Q6N075 450 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 TMEM154Q6P9G4 183 aa17.02■□□□□ 0.32
CKAP4-201ENST00000378026 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms