RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CYP11B2P19099 503 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 AXLP30530 894 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 HOXA11P31270 313 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 GTF2F1P35269 517 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 PPM1AP35813 382 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 KRT17Q04695 432 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 PCBP1Q15365 356 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 BRAPQ7Z569 592 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 ADGRD2Q7Z7M1 963 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 FAM193BQ96PV7 902 aaPredicted RBP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 TRAIPQ9BWF2 469 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 EIF2AQ9BY44 585 aaKnown RBP12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 C2orf40Q9H1Z8 148 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 RSAD1Q9HA92 442 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 ENTPD7Q9NQZ7 604 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
SMARCE1-203ENST00000377808 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 ZNF623O75123 536 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 OFD1O75665 1012 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 NPTXRO95502 500 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 EYA4O95677 639 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 POMCP01189 267 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 ARF4P18085 180 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 NRIP1P48552 1158 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 ALDH7A1P49419 539 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 NDUFV1P49821 464 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 BCAR1P56945 870 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 UBE3AQ05086 875 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 HYAL1Q12794 435 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 CAMK1Q14012 370 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 PPP2R5AQ15172 486 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 CLUL1Q15846 466 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 UBXN11Q5T124 520 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 PABPC5Q96DU9 382 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 CCDC51Q96ER9 411 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 TCF25Q9BQ70 676 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 NFKBIZQ9BYH8 718 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 TBC1D13Q9NVG8 400 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 PRMT7Q9NVM4 692 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 SPG21Q9NZD8 308 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 HES2Q9Y543 173 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 IPPQ9Y573 584 aa12.8□□□□□ -0.36
SMARCE1-203ENST00000377808 ATG2AQ2TAZ0 1938 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 TCF20Q9UGU0 1960 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 CCDC169A6NNP5 214 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 NCK2O43639 380 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 BMP15O95972 392 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 PRKCBP05771 671 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 BMP1P13497 986 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 NAMPTP43490 491 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 MAPK6Q16659 721 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 AMHR2Q16671 573 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 AGMOQ6ZNB7 445 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 TMC7Q7Z402 723 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 CABP7Q86V35 215 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 CNNM3Q8NE01 707 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 KIFAP3Q92845 792 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 TMEM169Q96HH4 297 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 TLE6Q9H808 572 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 PARP2Q9UGN5 583 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 CNTNAP2Q9UHC6 1331 aa12.79□□□□□ -0.36
SMARCE1-203ENST00000377808 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 TNFRSF10AO00220 468 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 PER2O15055 1255 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 LINC01565O15544 149 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 HIP1RO75146 1068 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 SYT1P21579 422 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 MLH1P40692 756 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 UBA7P41226 1012 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 ERVFC1P60507 584 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 RAD51AP2Q09MP3 1159 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 DMP1Q13316 513 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 MRPL10Q7Z7H8 261 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 SMG8Q8ND04 991 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms