RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 HYAL1Q12794 435 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 ECM1Q16610 540 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 LONRF3Q496Y0 759 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 CDCA2Q69YH5 1023 aaPredicted RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 PDE12Q6L8Q7 609 aaKnown RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 MRPL10Q7Z7H8 261 aaKnown RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 HACE1Q8IYU2 909 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 PRIMPOLQ96LW4 560 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 RSAD1Q9HA92 442 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 UBN1Q9NPG3 1134 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 SPG21Q9NZD8 308 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 DNM3Q9UQ16 869 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 FSD2A1L4K1 749 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 PP2D1A8MPX8 630 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 ZC3H11AO75152 810 aaKnown RBP eCLIP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 OFD1O75665 1012 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 BMP15O95972 392 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 IRS1P35568 1242 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 ALDH7A1P49419 539 aaKnown RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 RNASELQ05823 741 aaKnown RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 IL17AQ16552 155 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 PUS10Q3MIT2 529 aaKnown RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 UBXN11Q5T124 520 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 MICAL1Q8TDZ2 1067 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 KIFAP3Q92845 792 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 INTS4Q96HW7 963 aaKnown RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 CPB2Q96IY4 423 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 IFT74Q96LB3 600 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 TRIM6Q9C030 488 aaPredicted RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 CSRNP2Q9H175 543 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 TBC1D13Q9NVG8 400 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 PRMT7Q9NVM4 692 aaPredicted RBP18.62■□□□□ 0.57
HMGN4-201ENST00000377575 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
HMGN4-201ENST00000377575 VWA3AA6NCI4 1184 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 MEIS3P2A8K0S8 358 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 K7ELQ4 463 aaPredicted RBP18.61■□□□□ 0.57
HMGN4-201ENST00000377575 TNFRSF10AO00220 468 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 EYA4O95677 639 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 ITGA4P13612 1032 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 ARF4P18085 180 aaPredicted RBP18.61■□□□□ 0.57
HMGN4-201ENST00000377575 PBX3P40426 434 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 NAMPTP43490 491 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 BCAR1P56945 870 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 AMHR2Q16671 573 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 CTC1Q2NKJ3 1217 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 AGMOQ6ZNB7 445 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 DEPTORQ8TB45 409 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 IGFLR1Q9H665 355 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 ENTPD7Q9NQZ7 604 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 KANSL3Q9P2N6 904 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 FAM50BQ9Y247 325 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 IPPQ9Y573 584 aa18.61■□□□□ 0.57
HMGN4-201ENST00000377575 H3BQ06 376 aaPredicted RBP18.6■□□□□ 0.57
HMGN4-201ENST00000377575 FSCN2O14926 492 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 SLC27A1Q6PCB7 646 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 ADGRD2Q7Z7M1 963 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 KCTD17Q8N5Z5 321 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 TMEM169Q96HH4 297 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 MMTAG2Q9BU76 263 aaKnown RBP18.6■□□□□ 0.57
HMGN4-201ENST00000377575 EIF2AQ9BY44 585 aaKnown RBP18.6■□□□□ 0.57
HMGN4-201ENST00000377575 MYH15Q9Y2K3 1946 aa18.6■□□□□ 0.57
HMGN4-201ENST00000377575 E9PMD0 336 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 B4GALT5O43286 388 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 CDC25AP30304 524 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 NRIP1P48552 1158 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 NDUFV1P49821 464 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 ZRSR1Q15695 479 aaKnown RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 MAPK6Q16659 721 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 TMEM132AQ24JP5 1023 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 HYIQ5T013 277 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 PLPP4Q5VZY2 271 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 PTCRAQ6ISU1 281 aaPredicted RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 EFHBQ8N7U6 833 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 SMG8Q8ND04 991 aaKnown RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 BSNDQ8WZ55 320 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 AK8Q96MA6 479 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 FAM193BQ96PV7 902 aaPredicted RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 CDCA3Q99618 268 aaPredicted RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 GBP3Q9H0R5 595 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 TLE6Q9H808 572 aa18.59■□□□□ 0.57
HMGN4-201ENST00000377575 NGRNQ9NPE2 291 aaKnown RBP18.59■□□□□ 0.57
HMGN4-201ENST00000377575 ZMYM2Q9UBW7 1377 aa18.58■□□□□ 0.57
HMGN4-201ENST00000377575 A0A1B0GUA9 196 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 N4BP3O15049 544 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 SLC26A4O43511 780 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 PRKCBP05771 671 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 GTF2F1P35269 517 aaKnown RBP eCLIP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms