RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 B4GALT5O43286 388 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 SELPP16109 830 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 MAPK6Q16659 721 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 FAM187BQ17R55 369 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 ANO6Q4KMQ2 910 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 FBXO47Q5MNV8 452 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 LRSAM1Q6UWE0 723 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 FAM228AQ86W67 206 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 CTNND2Q9UQB3 1225 aa23.4■■□□□ 1.34
CBWD3-202ENST00000377342 NOC2LQ9Y3T9 749 aaKnown RBP23.4■■□□□ 1.34
CBWD3-202ENST00000377342 PMS1P54277 932 aaKnown RBP23.39■■□□□ 1.34
CBWD3-202ENST00000377342 ZCWPW2Q504Y3 356 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 KLHL10Q6JEL2 608 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 SLC39A4Q6P5W5 647 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 ACCSQ96QU6 501 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 PPP1R12CQ9BZL4 782 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 SEMA6BQ9H3T3 888 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 AGO3Q9H9G7 860 aaKnown RBP23.39■■□□□ 1.34
CBWD3-202ENST00000377342 TMEM39AQ9NV64 488 aa23.39■■□□□ 1.34
CBWD3-202ENST00000377342 PRMT7Q9NVM4 692 aaPredicted RBP23.39■■□□□ 1.34
CBWD3-202ENST00000377342 CNTNAP2Q9UHC6 1331 aa23.39■■□□□ 1.33
CBWD3-202ENST00000377342 TISP43B9A030 160 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 TGFB1I1O43294 461 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 TSPAN1O60635 241 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 PIGRP01833 764 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 GHRP10912 638 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 ABCD1P33897 745 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 STRN3Q13033 797 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 LPIN1Q14693 890 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 GPNMBQ14956 572 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 KNOP1Q1ED39 458 aaKnown RBP23.38■■□□□ 1.33
CBWD3-202ENST00000377342 TRIM43BA6NCK2 446 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 TRIM49BA6NDI0 452 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 ACKR2O00590 384 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 TRIM43Q96BQ3 446 aaPredicted RBP23.38■■□□□ 1.33
CBWD3-202ENST00000377342 PRIMPOLQ96LW4 560 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 PCDH10Q9P2E7 1040 aa23.38■■□□□ 1.33
CBWD3-202ENST00000377342 PSMA7O14818 248 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 KIAA0355O15063 1070 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 SFPQP23246 707 aaKnown RBP eCLIP23.37■■□□□ 1.33
CBWD3-202ENST00000377342 ITGB8P26012 769 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 CYP2C18P33260 490 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 PPP1R2P41236 205 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 PAK1Q13153 545 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 STIM1Q13586 685 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 CENPPQ6IPU0 288 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 NELFBQ8WX92 580 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 P2RX5Q93086 422 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 DHTKD1Q96HY7 919 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-202ENST00000377342 TARS2Q9BW92 718 aaKnown RBP23.37■■□□□ 1.33
CBWD3-202ENST00000377342 TMEM206Q9H813 350 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 DACH1Q9UI36 760 aa23.37■■□□□ 1.33
CBWD3-202ENST00000377342 ANKRD63C9JTQ0 380 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 HNRNPDLO14979 420 aaKnown RBP23.36■■□□□ 1.33
CBWD3-202ENST00000377342 KIF20AO95235 890 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 PRPF4BQ13523 1007 aaKnown RBP23.36■■□□□ 1.33
CBWD3-202ENST00000377342 TSHZ1Q6ZSZ6 1077 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 MRPL4Q9BYD3 311 aaKnown RBP23.36■■□□□ 1.33
CBWD3-202ENST00000377342 ERVK-5Q9HDB9 667 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
CBWD3-202ENST00000377342 AGPAT5Q9NUQ2 364 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 SQORQ9Y6N5 450 aa23.36■■□□□ 1.33
CBWD3-202ENST00000377342 ABLIM1O14639 778 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 NBNO60934 754 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 RPS6KA5O75582 802 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 ARF4P18085 180 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-202ENST00000377342 CCNE1P24864 410 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 CCL23P55773 120 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 PCBP1Q15365 356 aaKnown RBP eCLIP23.35■■□□□ 1.33
CBWD3-202ENST00000377342 TTI2Q6NXR4 508 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 CATSPER4Q7RTX7 472 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 SCLYQ96I15 445 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 ACO2Q99798 780 aaKnown RBP23.35■■□□□ 1.33
CBWD3-202ENST00000377342 GBP3Q9H0R5 595 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 TYW1Q9NV66 732 aaKnown RBP23.35■■□□□ 1.33
CBWD3-202ENST00000377342 EXOC7Q9UPT5 735 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 ERLIN2O94905 339 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 HOXA11P31270 313 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-202ENST00000377342 CD52P31358 61 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 STX17P56962 302 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 ZPBP2Q6X784 338 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 SYCP3Q8IZU3 236 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 BICD1Q96G01 975 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 CPB2Q96IY4 423 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 HAPLN2Q9GZV7 340 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 TSPY26PQ9H489 355 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 AGPAT3Q9NRZ7 376 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 ST3GAL5Q9UNP4 418 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 TRAF3IP3Q9Y228 551 aa23.35■■□□□ 1.33
CBWD3-202ENST00000377342 PDXKO00764 312 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 PROZP22891 400 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 ERCC5P28715 1186 aaPredicted RBP23.34■■□□□ 1.33
CBWD3-202ENST00000377342 ADSSP30520 456 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 EEF1DP3Q658K8 133 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 ANKRD40Q6AI12 368 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 USP38Q8NB14 1042 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 VWCEQ96DN2 955 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 PDZD7Q9H5P4 517 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 PTPRHQ9HD43 1115 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 RWDD2AQ9UIY3 292 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms