RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 AGXT2Q9BYV1 514 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 SPTLC3Q9NUV7 552 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 TXNDC16Q9P2K2 825 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 ASIC3Q9UHC3 531 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 NR2E3Q9Y5X4 410 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 FAM169AQ9Y6X4 670 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 LTBP3Q9NS15 1303 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 DLG5Q8TDM6 1919 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 IKBKBO14920 756 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 TRAPPC3O43617 180 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 PLCB4Q15147 1175 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 SNRNP35Q16560 246 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 PTGISQ16647 500 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 AMHR2Q16671 573 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 THAP9Q9H5L6 903 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 AMFRQ9UKV5 643 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 PAXBP1Q9Y5B6 917 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 DPYSL4O14531 572 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 CA12O43570 354 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PRKCZQ05513 592 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 GRB10Q13322 594 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 TMEM132DQ14C87 1099 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 ZNF484Q5JVG2 852 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 DNAJC24Q6P3W2 148 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 ELMSAN1Q6PJG2 1045 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 ERICH1Q86X53 443 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 CCDC105Q8IYK2 499 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 CALN1Q9BXU9 219 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 IMPACTQ9P2X3 320 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 FNDC3AQ9Y2H6 1198 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 A6NJR5 290 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 KCNK3O14649 394 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 LGALS2P05162 132 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PSEN2P49810 448 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 APLP1P51693 650 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 EHHADHQ08426 723 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 ANKRD23Q86SG2 305 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 POLR3CQ9BUI4 534 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 KIF9Q9HAQ2 790 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 TYW5A2RUC4 315 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 MED7O43513 233 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 TLR2O60603 784 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 ITGB5P18084 799 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PPARDQ03181 441 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 CCDC60Q8IWA6 550 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 FBXL13Q8NEE6 735 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PPP2R3CQ969Q6 453 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 IGSF9BQ9UPX0 1349 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PRRG1O14668 218 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 GPR182O15218 404 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 NKRFO15226 690 aaKnown RBP eCLIP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 EIF4A3P38919 411 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 NPTX2P47972 431 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 BCAR1P56945 870 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 DYNLT1P63172 113 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 UAP1Q16222 522 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 IFNL1Q8IU54 200 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 SYT2Q8N9I0 419 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 CCNYQ8ND76 341 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 RDM1Q8NG50 284 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 SEPT8Q92599 483 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 PI4K2AQ9BTU6 479 aa9.11□□□□□ -0.95
CRNKL1-202ENST00000377340 MOCS2O96007 188 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 POMCP01189 267 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 WEE2P0C1S8 567 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 HSDL1Q3SXM5 330 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 PPP6R3Q5H9R7 873 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 OTOP1Q7RTM1 612 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 PHRF1Q9P1Y6 1649 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 EVCP57679 992 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 JAG1P78504 1218 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 NAPGQ99747 312 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 C11orf70Q9BRQ4 267 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 RAB20Q9NX57 234 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 PDXKO00764 312 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 TEX33O43247 280 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 STK10O94804 968 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 GAS8O95995 478 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 SLC4A1P02730 911 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 RARRES1P49788 294 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 NCOA4Q13772 614 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 TMC7Q7Z402 723 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 ELMOD1Q8N336 334 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 RABGGTAQ92696 567 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 RBPJLQ9UBG7 517 aa9.1□□□□□ -0.95
CRNKL1-202ENST00000377340 PHLPP2Q6ZVD8 1323 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 M0QYV0 167 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 GPR25O00155 361 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 AKAP5P24588 427 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ST3GAL1Q11201 340 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ALKBH5Q6P6C2 394 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ZNF771Q7L3S4 317 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 SEPT5Q99719 369 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-202ENST00000377340 CPSF3Q9UKF6 684 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms