RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 APBB1IPQ7Z5R6 666 aaPredicted RBP24.43■■□□□ 1.5
SRM-201ENST00000376957 MICAL1Q8TDZ2 1067 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 POF1BQ8WVV4 589 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 FAM193BQ96PV7 902 aaPredicted RBP24.43■■□□□ 1.5
SRM-201ENST00000376957 ASB2Q96Q27 587 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 ADPGKQ9BRR6 497 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 CWH43Q9H720 699 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 RSAD1Q9HA92 442 aa24.43■■□□□ 1.5
SRM-201ENST00000376957 FGF18O76093 207 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 ATF7P17544 494 aaPredicted RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 NCLP19338 710 aaKnown RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 TXLNAP40222 546 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 DMP1Q13316 513 aaPredicted RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 CDCA2Q69YH5 1023 aaPredicted RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 SLC27A1Q6PCB7 646 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 KCNT2Q6UVM3 1135 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 PPP4R3CPQ6ZMV5 832 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 MRPL10Q7Z7H8 261 aaKnown RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 SPPL3Q8TCT6 385 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 MMTAG2Q9BU76 263 aaKnown RBP24.42■■□□□ 1.5
SRM-201ENST00000376957 PRDM6Q9NQX0 595 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 SPG21Q9NZD8 308 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 INPP5FQ9Y2H2 1132 aa24.42■■□□□ 1.5
SRM-201ENST00000376957 FSD2A1L4K1 749 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 ARF4P18085 180 aaPredicted RBP24.41■■□□□ 1.5
SRM-201ENST00000376957 RESTQ13127 1097 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 PRPF4BQ13523 1007 aaKnown RBP24.41■■□□□ 1.5
SRM-201ENST00000376957 FAM187BQ17R55 369 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 LONRF3Q496Y0 759 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 RINT1Q6NUQ1 792 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 LPPQ93052 612 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 CPB2Q96IY4 423 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 RNF19AQ9NV58 838 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 MTMR6Q9Y217 621 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 LZTS1Q9Y250 596 aa24.41■■□□□ 1.5
SRM-201ENST00000376957 RBM19Q9Y4C8 960 aaKnown RBP24.41■■□□□ 1.5
SRM-201ENST00000376957 KIAA1671Q9BY89 1806 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 A0A1B0GUA9 196 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 CCDC169A6NNP5 214 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 K7ERI5 159 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 PLCB3Q01970 1234 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 TCEAL5Q5H9L2 206 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 SYT2Q8N9I0 419 aaPredicted RBP24.4■■□□□ 1.5
SRM-201ENST00000376957 ZNF396Q96N95 335 aaPredicted RBP24.4■■□□□ 1.5
SRM-201ENST00000376957 FZD8Q9H461 694 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 TLR9Q9NR96 1032 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 STK39Q9UEW8 545 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 CCDC39Q9UFE4 941 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 IPPQ9Y573 584 aa24.4■■□□□ 1.5
SRM-201ENST00000376957 DLL1O00548 723 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 N4BP3O15049 544 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 OFD1O75665 1012 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 PRKCBP05771 671 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 SMTNP53814 917 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 UBXN11Q5T124 520 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 LRRC55Q6ZSA7 311 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 EP400NLQ6ZTU2 488 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 MRPS27Q92552 414 aaKnown RBP24.39■■□□□ 1.49
SRM-201ENST00000376957 PLIN2Q99541 437 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 CLIC4Q9Y696 253 aa24.39■■□□□ 1.49
SRM-201ENST00000376957 ACKR2O00590 384 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 HIP1RO75146 1068 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 ZC3H11AO75152 810 aaKnown RBP eCLIP24.38■■□□□ 1.49
SRM-201ENST00000376957 NR1I2O75469 434 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 CSPG5O95196 566 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 PLA2G4BP0C869 781 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 LIG1P18858 919 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 GUCY2CP25092 1073 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 AMHR2Q16671 573 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 C1orf186Q6ZWK4 172 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 TMEM169Q96HH4 297 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 GIT1Q9Y2X7 761 aa24.38■■□□□ 1.49
SRM-201ENST00000376957 PEX3P56589 373 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 BCAR1P56945 870 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 CEBPZQ03701 1054 aaKnown RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 TMEM119Q4V9L6 283 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 AGMOQ6ZNB7 445 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 PABPC5Q96DU9 382 aaKnown RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 PNMA5Q96PV4 448 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 EIF2AQ9BY44 585 aaKnown RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 UBE2ZQ9H832 354 aaPredicted RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 NGRNQ9NPE2 291 aaKnown RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 KMT5AQ9NQR1 393 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 TBC1D13Q9NVG8 400 aa24.37■■□□□ 1.49
SRM-201ENST00000376957 LARSQ9P2J5 1176 aaKnown RBP24.37■■□□□ 1.49
SRM-201ENST00000376957 H0YCG3 227 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 B4GALT5O43286 388 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 NPTXRO95502 500 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 ALDH2P05091 517 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 PUS10Q3MIT2 529 aaKnown RBP24.36■■□□□ 1.49
SRM-201ENST00000376957 BSNDQ8WZ55 320 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 RUSC1Q9BVN2 902 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 CCSER1Q9C0I3 900 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 GBP3Q9H0R5 595 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 FAM50BQ9Y247 325 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 SRPRBQ9Y5M8 271 aaKnown RBP24.36■■□□□ 1.49
SRM-201ENST00000376957 EYSQ5T1H1 3165 aa24.36■■□□□ 1.49
SRM-201ENST00000376957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.35■■□□□ 1.49
SRM-201ENST00000376957 KRT18P05783 430 aaKnown RBP24.35■■□□□ 1.49
SRM-201ENST00000376957 MARCKSP29966 332 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms