RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NT5DC3Q86UY8 548 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LNX1Q8TBB1 728 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NSFP46459 744 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SLITRK6Q9H5Y7 841 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MRPL11Q9Y3B7 192 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MYH6P13533 1939 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 APBA3O96018 575 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KRT19P08727 400 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 HAUS6Q7Z4H7 955 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CBWD2Q8IUF1 395 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PARP9Q8IXQ6 854 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 XXYLT1Q8NBI6 393 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ALG3Q92685 438 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RSRC1Q96IZ7 334 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CTNNAL1Q9UBT7 734 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GINS2Q9Y248 185 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TAF1P21675 1872 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 AKAP11Q9UKA4 1901 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MEIS2O14770 477 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RWDD2BP57060 319 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KRT17Q04695 432 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ITGB3BPQ13352 177 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SETDB1Q15047 1291 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EPHA7Q15375 998 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SCARA5Q6ZMJ2 495 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMC3Q7Z5M5 1100 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SLC47A2Q86VL8 602 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PPP1R16BQ96T49 567 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KLHL14Q9P2G3 628 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 L3MBTL1Q9Y468 752 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GOLGA8RI6L899 631 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ECE2O60344 883 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ALDH1B1P30837 517 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MTERF2Q49AM1 385 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 HHATQ5VTY9 493 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SPATS2Q86XZ4 545 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KMT5AQ9NQR1 393 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SKAP2O75563 359 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ARHGEF19Q8IW93 802 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ACCSQ96QU6 501 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SH3GL2Q99962 352 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 INTUQ9ULD6 942 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PCDHB4Q9Y5E5 795 aa15.43■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GJB6O95452 261 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SPATA31C1P0DKV0 1188 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PCK1P35558 622 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 HSPA9P38646 679 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LIG4P49917 911 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MFAP3P55082 362 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ARHGEF16Q5VV41 709 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RFX8Q6ZV50 586 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SYN2Q92777 582 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KLF6Q99612 283 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 IMPG2Q9BZV3 1241 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LRRC4BQ9NT99 713 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MYH15Q9Y2K3 1946 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TCRBV7S2A1N4TA0A589 114 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CC2D2BQ6DHV5 1058 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NLRX1Q86UT6 975 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SUCLA2Q9P2R7 463 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SUN1O94901 812 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PYGMP11217 842 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 YY1P25490 414 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ACOT2P49753 483 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DMP1Q13316 513 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CYB5D1Q6P9G0 228 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LDHDQ86WU2 507 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RHOT2Q8IXI1 618 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 C4orf33Q8N1A6 199 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ZSWIM2Q8NEG5 633 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DCAF4Q8WV16 495 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 WDR11Q9BZH6 1224 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 DCTN4Q9UJW0 460 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ASTN1O14525 1302 aa15.42■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RPS6KA5O75582 802 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ASTE1Q2TB18 679 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 UNC45AQ9H3U1 944 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 HSPBP1Q9NZL4 362 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GJA3Q9Y6H8 435 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 TMEM120BA0PK00 339 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RASA4BC9J798 803 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RASA4O43374 803 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SLITRK3O94933 977 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 MYBL1P10243 752 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 POLD1P28340 1107 aa15.41■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RPL21P46778 160 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms