RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 MAFAQ8NHW3 353 aaPredicted RBP23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ARNTL2Q8WYA1 636 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SPATA32Q96LK8 384 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 REEP2Q9BRK0 252 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRDM6Q9NQX0 595 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PCDHB2Q9Y5E7 798 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRUNE2Q8WUY3 3088 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 VCANP13611 3396 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 EPOPA6NHQ4 379 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRKCBP05771 671 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SKIP12755 728 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 LIG1P18858 919 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ANP32AP39687 249 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 RAB27AP51159 221 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 EFNA5P52803 228 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 MAPK6Q16659 721 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NOTUMQ6P988 496 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SV2BQ7L1I2 683 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SPIRE2Q8WWL2 714 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 MYLIPQ8WY64 445 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRIMPOLQ96LW4 560 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NTPCRQ9BSD7 190 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 C17orf80Q9BSJ5 609 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 KMT5AQ9NQR1 393 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 MTUS1Q9ULD2 1270 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ODF2LQ9ULJ1 636 aa23.15■■□□□ 1.3
MAP1LC3A-202ENST00000374837 A0A1B0GUA9 196 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TTLL13PA6NNM8 815 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TBKBP1A7MCY6 615 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 RFXAPO00287 272 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ACKR2O00590 384 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 KRT18P05783 430 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 RESP18Q5W5W9 173 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MRPL10Q7Z7H8 261 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CDR2LQ86X02 465 aaPredicted RBP23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LPPQ93052 612 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CCDC51Q96ER9 411 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CASD1Q96PB1 797 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 EIF2AQ9BY44 585 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ARHGAP28Q9P2N2 729 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 KCNG1Q9UIX4 513 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 USP20Q9Y2K6 914 aa23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 RBM19Q9Y4C8 960 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MYMKA6NI61 221 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 K7ERI5 159 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SLC16A4O15374 487 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 HOXA2O43364 376 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 EDN1P05305 212 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LINC00271P0C7V0 271 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 PRPF4BQ13523 1007 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 E2F4Q16254 413 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LONRF3Q496Y0 759 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CLLU1OSQ5K130 101 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SCAND2PQ9GZW5 306 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TMEM117Q9H0C3 514 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TMEM134Q9H6X4 195 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 FAM13BQ9NYF5 915 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MRPL42Q9Y6G3 142 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 GBF1Q92538 1859 aa23.13■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CNTNAP2Q9UHC6 1331 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MYH15Q9Y2K3 1946 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MEIS3P2A8K0S8 358 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 FAM13AO94988 1023 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ZNF131P52739 623 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SMTNP53814 917 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 NT5DC1Q5TFE4 455 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 DYMQ7RTS9 669 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TAS1R3Q7RTX0 852 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TMEM192Q8IY95 271 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MYCT1Q8N699 235 aa23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SMG8Q8ND04 991 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CLP1Q92989 425 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LARSQ9P2J5 1176 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ADGRE1Q14246 886 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 EPC2Q52LR7 807 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ADALQ6DHV7 355 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 IQUBQ8NA54 791 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TMEM161BQ8NDZ6 487 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 HELQQ8TDG4 1101 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 DDX12PQ92771 950 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 DHX58Q96C10 678 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 PGBD4Q96DM1 585 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SAMD11Q96NU1 681 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ZHX3Q9H4I2 956 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 PARVGQ9HBI0 331 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 GDPD2Q9HCC8 539 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 IPPQ9Y573 584 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 COL4A6Q14031 1691 aa23.11■■□□□ 1.29
MAP1LC3A-202ENST00000374837 POLR2DO15514 142 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TBCAO75347 108 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 NPTXRO95502 500 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 BMPR1AP36894 532 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TMEM132AQ24JP5 1023 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 SLC27A1Q6PCB7 646 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 AGMOQ6ZNB7 445 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ABI1Q8IZP0 508 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CNNM3Q8NE01 707 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 FBXO22Q8NEZ5 403 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 DNAJC19Q96DA6 116 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms