RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NEUROD4Q9HD90 331 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 MRPL40Q9NQ50 206 aaKnown RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 ANO10Q9NW15 660 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 SNX8Q9Y5X2 465 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 A0A0G2JPF8 293 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 HNRNPCL3B7ZW38 293 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 HNRNPCL4P0DMR1 293 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 S100A1P23297 94 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 CSNK2BP67870 215 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 KCNC4Q03721 635 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 PPP2R5DQ14738 602 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 INSCQ1MX18 579 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 Q3ZCU0 254 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 AADACL4Q5VUY2 407 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 ZNF704Q6ZNC4 412 aaPredicted RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 TPH2Q8IWU9 490 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 DNAJB8Q8NHS0 232 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 TNIP3Q96KP6 325 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 ATP6V1G3Q96LB4 118 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 ASB16Q96NS5 453 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 CGREF1Q99674 301 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 PIP5K1AQ99755 562 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 C8orf33Q9H7E9 229 aaPredicted RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 BRD9Q9H8M2 597 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 KIAA1586Q9HCI6 787 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 C12orf4Q9NQ89 552 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 RASAL2Q9UJF2 1139 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 LEMD3Q9Y2U8 911 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 DAGLAQ9Y4D2 1042 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 GPR75-ASB3A0A0A6YYF3 556 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 FAM221AA4D161 298 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 CCDC151A5D8V7 595 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 EIF2S2P20042 333 aaKnown RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 OR1G1P47890 313 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
USP48-203ENST00000374732 ODF1Q14990 250 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 ELF2Q15723 593 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 MAPKAPK3Q16644 382 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 USH1GQ495M9 461 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 PABPC1LQ4VXU2 614 aaKnown RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 HECTD3Q5T447 861 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SLC6A19Q695T7 634 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 FCRLBQ6BAA4 426 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 IGF2-ASQ6U949 168 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 CCDC81Q6ZN84 652 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 FAM83AQ86UY5 434 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 CCDC25Q86WR0 208 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SUPT20HQ8NEM7 779 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 KCTD13Q8WZ19 329 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 KIFAP3Q92845 792 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SNX25Q9H3E2 840 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 SUCLA2Q9P2R7 463 aaPredicted RBP8.52□□□□□ -1.05
USP48-203ENST00000374732 TRPS1Q9UHF7 1281 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 USP21Q9UK80 565 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 CLEC4AQ9UMR7 237 aa8.52□□□□□ -1.05
USP48-203ENST00000374732 OR5K4A6NMS3 321 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 RNF113AO15541 343 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 USP1O94782 785 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 DHX34Q14147 1143 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 MINDY4Q4G0A6 757 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 TTBK2Q6IQ55 1244 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 B3GNT6Q6ZMB0 384 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 COL26A1Q96A83 441 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 HS6ST2Q96MM7 605 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 TSNARE1Q96NA8 513 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CIB1Q99828 191 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 LPIN3Q9BQK8 851 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 LY9Q9HBG7 655 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 LNPEPQ9UIQ6 1025 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ZMYND8Q9ULU4 1186 aaPredicted RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SGK1O00141 431 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 FOXP2O15409 715 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 FLOT1O75955 427 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SEC24BO95487 1268 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 GSTT2P0CG29 244 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 GSTT2BP0CG30 244 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 EZRP15311 586 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 RPS2P15880 293 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 GDI1P31150 447 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ADH7P40394 386 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CYP4F8P98187 520 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SMAD1Q15797 465 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 GEN1Q17RS7 908 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CCDC14Q49A88 953 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 MDH1BQ5I0G3 518 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CYB5D1Q6P9G0 228 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ISLR2Q6UXK2 745 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms