RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 CCPG1Q9ULG6 757 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 PFASO15067 1338 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 MYH10P35580 1976 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 HMGB1P1B2RPK0 211 aaPredicted RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 KRIT1O00522 736 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 PMM2O15305 246 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 EIF3HO15372 352 aaKnown RBP eCLIP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 TTMPQ5BVD1 217 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 DNAJC21Q5F1R6 531 aaKnown RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 KDM7AQ6ZMT4 941 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 OLIG1Q8TAK6 271 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 HINFPQ9BQA5 517 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 FAM114A2Q9NRY5 505 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 ANKRD62A6NC57 917 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 GOLGA6L10A6NI86 522 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 WDR46O15213 610 aaKnown RBP15.09■□□□□ 0.01
HMGCL-203ENST00000374490 SART1O43290 800 aaKnown RBP15.09■□□□□ 0.01
HMGCL-203ENST00000374490 GNGT1P63211 74 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 UBXN2AP68543 259 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 PPATQ06203 517 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 HLTFQ14527 1009 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMGCL-203ENST00000374490 COG2Q14746 738 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 GLYCTKQ8IVS8 523 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 LPAR1Q92633 364 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 HVCN1Q96D96 273 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 CARD9Q9H257 536 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 BCAS3Q9H6U6 928 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 WRAP73Q9P2S5 460 aaPredicted RBP15.09■□□□□ 0.01
HMGCL-203ENST00000374490 UBIAD1Q9Y5Z9 338 aa15.09■□□□□ 0.01
HMGCL-203ENST00000374490 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 ESYT3A0FGR9 886 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 SRRM3A6NNA2 597 aaPredicted RBP15.08■□□□□ 0
HMGCL-203ENST00000374490 MYO1CO00159 1063 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 SLC10A3P09131 477 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 FAM153BP0C7A2 387 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 TRIM49P0CI25 452 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 TRIM49CP0CI26 452 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 PLS3P13797 630 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 VAMP7P51809 220 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 RNASE9P60153 205 aaKnown RBP15.08■□□□□ 0
HMGCL-203ENST00000374490 ERVK-9P63128 1117 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 FKBP1BP68106 108 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 FAM153CQ494X1 144 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 SPDYCQ5MJ68 293 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 PCNX4Q63HM2 1172 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
HMGCL-203ENST00000374490 DAW1Q8N136 415 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 ARFGAP2Q8N6H7 521 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 BANK1Q8NDB2 785 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 SLC35G2Q8TBE7 412 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 ZBTB9Q96C00 473 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 AGPAT1Q99943 283 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 GPR88Q9GZN0 384 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 AGO4Q9HCK5 861 aaKnown RBP15.08■□□□□ 0
HMGCL-203ENST00000374490 POLD4Q9HCU8 107 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 FAM153AQ9UHL3 310 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 EXOC7Q9UPT5 735 aa15.08■□□□□ 0
HMGCL-203ENST00000374490 MIF4GDA9UHW6 222 aaKnown RBP15.07■□□□□ 0
HMGCL-203ENST00000374490 ZBTB39O15060 712 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 TRPA1O75762 1119 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 ITGB5P18084 799 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 QARSP47897 775 aaKnown RBP15.07■□□□□ 0
HMGCL-203ENST00000374490 GUCY2FP51841 1108 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
HMGCL-203ENST00000374490 SLC20A2Q08357 652 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 C11orf63Q6NUN7 778 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 PRPF38AQ8NAV1 312 aaKnown RBP15.07■□□□□ 0
HMGCL-203ENST00000374490 MORC4Q8TE76 937 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 SEC14L1Q92503 715 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 ARL8AQ96BM9 186 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 ATP6V1G3Q96LB4 118 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 WRNIP1Q96S55 665 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 RAB17Q9H0T7 212 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 RASSF4Q9H2L5 321 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 AS3MTQ9HBK9 375 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 PICK1Q9NRD5 415 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 RNF186Q9NXI6 227 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 RSPH14Q9UHP6 348 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 TCEAL9Q9UHQ7 104 aa15.07■□□□□ 0
HMGCL-203ENST00000374490 FAM187AA6NFU0 413 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 ZSCAN5CA6NGD5 496 aaPredicted RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 ZNF233A6NK53 670 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 ZEB2O60315 1214 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 BUB1BO60566 1050 aaPredicted RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 INPP5BP32019 993 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 RARRES1P49788 294 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 JAK3P52333 1124 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
HMGCL-203ENST00000374490 TKFCQ3LXA3 575 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 SUPT20HL1Q3ZLR7 823 aa15.06■□□□□ 0
HMGCL-203ENST00000374490 EPC2Q52LR7 807 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms