RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 DIAPH2O60879 1101 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 AP1B1Q10567 949 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 PDCLQ13371 301 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 MED21Q13503 144 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.456e-7■■■□□ 15.4
VCL-202ENST00000372755 RAVER2Q9HCJ3 691 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 SFMBT1Q9UHJ3 866 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 POTEMA6NI47 508 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 PIK3R2O00459 728 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 KRT14P02533 472 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 BCAR1P56945 870 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 BEND6Q5SZJ8 279 aaPredicted RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 NUDCD3Q8IVD9 361 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TAGAPQ8N103 731 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TTC30BQ8N4P2 665 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 CCDC22O60826 627 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 LTKP29376 864 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 GFPT1Q06210 699 aaPredicted RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 SEMA3FQ13275 785 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TAS2R42Q7RTR8 314 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 PCDHGB4Q9UN71 923 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 ANKARQ7Z5J8 1434 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 SUSD4Q5VX71 490 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 PFASO15067 1338 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 H0Y3Z8 333 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 LARGE1O95461 756 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 COPB2P35606 906 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 STAT3P40763 770 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 QARSP47897 775 aaKnown RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 MAGOHP61326 146 aaKnown RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 PDIA2Q13087 525 aaKnown RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 TTLL11Q8NHH1 800 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 RALAP11233 206 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 GPS1Q13098 491 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TEX2Q8IWB9 1127 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 RAPGEF5Q92565 580 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 ZNF560Q96MR9 790 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 POLR3FQ9H1D9 316 aaPredicted RBP12.24□□□□□ -0.45
VCL-202ENST00000372755 NDFIP2Q9NV92 336 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 SLC9A2Q9UBY0 812 aa12.24□□□□□ -0.45
VCL-202ENST00000372755 ATICP31939 592 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 RHPN2Q8IUC4 686 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 ARHGAP10A1A4S6 786 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 TTC7AQ9ULT0 858 aaPredicted RBP12.23□□□□□ -0.45
VCL-202ENST00000372755 AP3B1O00203 1094 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 KCNA2P16389 499 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 PSMC5P62195 406 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 DCAF4L1Q3SXM0 396 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 TBC1D19Q8N5T2 526 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 ICA1LQ8NDH6 482 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 GRAMD1AQ96CP6 724 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 TRIM49BA6NDI0 452 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 MAGEA9P43362 315 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 GRM4Q14833 912 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 KRT72Q14CN4 511 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 ZBED8Q8IZ13 594 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 GPD1LQ8N335 351 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 DYRK4Q9NR20 520 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 H7C1W4 665 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 BRAFP15056 766 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 MCAMP43121 646 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 OLFM3Q96PB7 478 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 PIM2Q9P1W9 311 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
VCL-202ENST00000372755 IL10P22301 178 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 ADORA2BP29275 332 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 NEK2P51955 445 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DRAP1Q14919 205 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 BTBD8Q5XKL5 378 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DDIASQ8IXT1 998 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 OSBPL9Q96SU4 736 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.45
VCL-202ENST00000372755 DNAJC6O75061 913 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 FDX1P10109 184 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 GGCXP38435 758 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 NME3Q13232 169 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DYNC1I2Q13409 638 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 ZNF235Q14590 738 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 VEPH1Q14D04 833 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 TRADDQ15628 312 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 PARVAQ9NVD7 372 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 UTYO14607 1347 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms