RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 TNFAIP3P21580 790 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 ARHGEF19Q8IW93 802 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.29■■□□□ 1.163e-7■■■■■ 46.3
VEGFA-204ENST00000372064 AGPAT1Q99943 283 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 KIFC3Q9BVG8 833 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 AS3MTQ9HBK9 375 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 UBE2TQ9NPD8 197 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-204ENST00000372064 FZD9O00144 591 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 BUB1BO60566 1050 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-204ENST00000372064 CCND2P30279 289 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 NLRX1Q86UT6 975 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 KLHL7Q8IXQ5 586 aa22.29■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA8IPA6NC78 632 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA8JA6NMD2 632 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA8KD6RF30 607 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 FAM153BP0C7A2 387 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 FAM153CQ494X1 144 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 ANGEL2Q5VTE6 544 aaKnown RBP22.28■■□□□ 1.16
VEGFA-204ENST00000372064 PALB2Q86YC2 1186 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 MOV10L1Q9BXT6 1211 aaKnown RBP22.28■■□□□ 1.16
VEGFA-204ENST00000372064 TAS2R14Q9NYV8 317 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 FAM153AQ9UHL3 310 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 AMFRQ9UKV5 643 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 ZNF214Q9UL59 606 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-204ENST00000372064 TTC7AQ9ULT0 858 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-204ENST00000372064 RLFQ13129 1914 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 ANKRD62A6NC57 917 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 CCDC169A6NNP5 214 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 CCDC188H7C350 402 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 OPA1O60313 960 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 ABCB4P21439 1286 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 ZNF746Q6NUN9 644 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-204ENST00000372064 WHAMMQ8TF30 809 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 IFT81Q8WYA0 676 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 GPRASP2Q96D09 838 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 HVCN1Q96D96 273 aa22.28■■□□□ 1.16
VEGFA-204ENST00000372064 HSF2BPO75031 334 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 LEKR1Q6ZMV7 388 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TMEM161BQ8NDZ6 487 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 ISCUQ9H1K1 167 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 SEPT11Q9NVA2 429 aaKnown RBP22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TELO2Q9Y4R8 837 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 PCDHA10Q9Y5I2 948 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA6CA6NDK9 693 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 ADRB2P07550 413 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA6DP0CG33 693 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 DSG3P32926 999 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 HADHBP55084 474 aaKnown RBP22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TCEAL1Q15170 157 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 MAP4K3Q8IVH8 894 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 ARHGEF26Q96DR7 871 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TMEM117Q9H0C3 514 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 THAP2Q9H0W7 228 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA6AQ9NYA3 693 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TBX20Q9UMR3 447 aa22.27■■□□□ 1.16
VEGFA-204ENST00000372064 TULP1O00294 542 aaPredicted RBP22.27■■□□□ 1.15
VEGFA-204ENST00000372064 MAFGO15525 162 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 ZNF862O60290 1169 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 NPTX2P47972 431 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 SOX10P56693 466 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 TMEM132BQ14DG7 1078 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 GABBR1Q9UBS5 961 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 EXOC7Q9UPT5 735 aa22.27■■□□□ 1.15
VEGFA-204ENST00000372064 ZNF541Q9H0D2 1346 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 ANKRD63C9JTQ0 380 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 DDX3YO15523 660 aaKnown RBP22.26■■□□□ 1.15
VEGFA-204ENST00000372064 RGS20O76081 388 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 ADSSP30520 456 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 IQCKQ8N0W5 287 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 FAM76AQ8TAV0 307 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 TAF1DQ9H5J8 278 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-204ENST00000372064 DIS3Q9Y2L1 958 aaKnown RBP22.26■■□□□ 1.15
VEGFA-204ENST00000372064 OAZ1P54368 228 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 ERVK-9P63128 1117 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 PPFIA1Q13136 1202 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 TRADDQ15628 312 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 CBWD2Q8IUF1 395 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 SLC20A1Q8WUM9 679 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 ZIM3Q96PE6 472 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 AP1M1Q9BXS5 423 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 MTFR1LQ9H019 292 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.26■■□□□ 1.157e-7■■■□□ 18.9
VEGFA-204ENST00000372064 ADAMTS5Q9UNA0 930 aa22.26■■□□□ 1.15
VEGFA-204ENST00000372064 KCNA2P16389 499 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 MXI1P50539 228 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 SP4Q02446 784 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 BSNDQ8WZ55 320 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 KAT5Q92993 513 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 SAAL1Q96ER3 474 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 C12orf42Q96LP6 360 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 NTPCRQ9BSD7 190 aaKnown RBP22.25■■□□□ 1.15
VEGFA-204ENST00000372064 COL11A1P12107 1806 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-204ENST00000372064 PHIPQ8WWQ0 1821 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 KRIT1O00522 736 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 SART1O43290 800 aaKnown RBP22.25■■□□□ 1.15
VEGFA-204ENST00000372064 SHOX2O60902 331 aaPredicted RBP22.25■■□□□ 1.15
VEGFA-204ENST00000372064 ECHS1P30084 290 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 SMTNP53814 917 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 CUL1Q13616 776 aa22.25■■□□□ 1.15
VEGFA-204ENST00000372064 NSUN6Q8TEA1 469 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms