RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SLC35G1Q2M3R5 365 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 RNF20Q5VTR2 975 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 CTR9Q6PD62 1173 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 BTNL9Q6UXG8 535 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 CYB5R4Q7L1T6 521 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 ZBTB46Q86UZ6 589 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 CCDC116Q8IYX3 515 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 GSTCDQ8NEC7 633 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 MNS1Q8NEH6 495 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 TBC1D22AQ8WUA7 517 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 C17orf50Q8WW18 174 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 HDAC2Q92769 488 aaKnown RBP4.34□□□□□ -1.72
MCF2-203ENST00000370576 DHRS1Q96LJ7 313 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 RBM14Q96PK6 669 aaKnown RBP4.34□□□□□ -1.72
MCF2-203ENST00000370576 DDX23Q9BUQ8 820 aaKnown RBP4.34□□□□□ -1.72
MCF2-203ENST00000370576 GHITMQ9H3K2 345 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 LUC7LQ9NQ29 371 aaKnown RBP4.34□□□□□ -1.72
MCF2-203ENST00000370576 ST7Q9NRC1 585 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 ACTR10Q9NZ32 417 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 RCOR1Q9UKL0 485 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 ZNF532Q9HCE3 1301 aa4.34□□□□□ -1.72
MCF2-203ENST00000370576 PATJQ8NI35 1801 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 FRMPD2Q68DX3 1309 aaPredicted RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 GPAA1O43292 621 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 RTN2O75298 545 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 IL33O95760 270 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PAHP00439 452 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CCDC172P0C7W6 258 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ARAFP10398 606 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PTPN2P17706 415 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 KLRK1P26718 216 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PDE6CP51160 858 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 SCRN1Q12765 414 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PTPAQ15257 358 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 C6orf118Q5T5N4 469 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 FCHSD1Q86WN1 690 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TBC1D21Q8IYX1 336 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ACSBG1Q96GR2 724 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 BPIFA3Q9BQP9 254 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 SPATA9Q9BWV2 254 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ABCB6Q9NP58 842 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ZNF358Q9NW07 568 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TMOD4Q9NZQ9 345 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ARPP21Q9UBL0 812 aaPredicted RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 CLIP2Q9UDT6 1046 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PPT2Q9UMR5 302 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A087X0M5 115 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A0G2JLW4 131 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A1B0GX30 115 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 MUSKO15146 869 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ST18O60284 1047 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 CHGBP05060 677 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 SLC10A3P09131 477 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 IFNAR1P17181 557 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TFEBP19484 476 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TROAPQ12815 778 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ADAM15Q13444 863 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 STRIP1Q5VSL9 837 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CRTC1Q6UUV9 634 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 DSTYKQ6XUX3 929 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TXNRD3Q86VQ6 643 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CERS5Q8N5B7 392 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 C4orf32Q8N8J7 132 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 ARL10Q8N8L6 244 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 SLC35G2Q8TBE7 412 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 DENND1AQ8TEH3 1009 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CD209Q9NNX6 404 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 AFG3L2Q9Y4W6 797 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CNTNAP5Q8WYK1 1306 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A1W2PQ27 194 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A1W2PQ64 194 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 A0A1W2PQD8 194 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PSDA5PKW4 1024 aaPredicted RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 DCAF8L1A6NGE4 600 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 FSCN2O14926 492 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 MECOMQ03112 1051 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CLUL1Q15846 466 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PPP2R5EQ16537 467 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 XKR5Q6UX68 686 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 NLRP14Q86W24 1093 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 CPOQ8IVL8 374 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TRMT44Q8IYL2 757 aaKnown RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 C19orf47Q8N9M1 422 aaKnown RBP4.33□□□□□ -1.72
MCF2-203ENST00000370576 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 COG1Q8WTW3 980 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 NEK1Q96PY6 1258 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 PPP1R9BQ96SB3 815 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 TXLNGYQ9BZA5 131 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 MAP4K5Q9Y4K4 846 aa4.33□□□□□ -1.72
MCF2-203ENST00000370576 LCHNA4D1U4 455 aa4.32□□□□□ -1.72
MCF2-203ENST00000370576 ZSCAN22P10073 491 aaPredicted RBP4.32□□□□□ -1.72
MCF2-203ENST00000370576 AKR1B1P15121 316 aa4.32□□□□□ -1.72
MCF2-203ENST00000370576 HOXA11P31270 313 aaPredicted RBP4.32□□□□□ -1.72
MCF2-203ENST00000370576 MC4RP32245 332 aa4.32□□□□□ -1.72
MCF2-203ENST00000370576 IGHMBP2P38935 993 aaKnown RBP4.32□□□□□ -1.72
MCF2-203ENST00000370576 SEPT6Q14141 434 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms