RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FGFR4P22455 802 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 CASP1P29466 404 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 GTF2BQ00403 316 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 EHHADHQ08426 723 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 PSMD2Q13200 908 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 AMHR2Q16671 573 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 PIN4Q9Y237 131 aaKnown RBP17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 PCDHB13Q9Y5F0 798 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 KLRC4O43908 158 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 SMC2O95347 1197 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 RPN1P04843 607 aaKnown RBP17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 KCNB1Q14721 858 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 TRAIPQ9BWF2 469 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 RMND1Q9NWS8 449 aa17.09■□□□□ 0.33
PRPF38B-202ENST00000370022 MYH11P35749 1972 aa17.08■□□□□ 0.33
PRPF38B-202ENST00000370022 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 KCNJ6P48051 423 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 PNOCQ13519 176 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 DSC3Q14574 896 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 SPATA20Q8TB22 786 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 GSDMAQ96QA5 445 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 ADAM2Q99965 735 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 TBX20Q9UMR3 447 aa17.08■□□□□ 0.32
PRPF38B-202ENST00000370022 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 ENPP3O14638 875 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 PPP1R37O75864 691 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 RHOBTB3O94955 611 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 GCNT3O95395 438 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 AMHP03971 560 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 SKIP12755 728 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 HOXA11P31270 313 aaPredicted RBP17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 ZPBP2Q6X784 338 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC24A5Q71RS6 500 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 TAS1R3Q7RTX0 852 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 SMARCE1Q969G3 411 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 EXOC7Q9UPT5 735 aa17.07■□□□□ 0.32
PRPF38B-202ENST00000370022 A0A1W2PPC1 479 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 EIF3DO15371 548 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 B4GALT5O43286 388 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 MGEA5O60502 916 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 RAB27AP51159 221 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 SHHQ15465 462 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TWF2Q6IBS0 349 aaKnown RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 CHRDL2Q6WN34 429 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 APBB1IPQ7Z5R6 666 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TMEM206Q9H813 350 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 UBE4BO95155 1302 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 N4BP3O15049 544 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 PIGRP01833 764 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 C9orf50Q5SZB4 431 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 L1TD1Q5T7N2 865 aaKnown RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 ATF7IP2Q5U623 682 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 RTN4RL1Q86UN2 441 aaPredicted RBP17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 ACCSQ96QU6 501 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 TNFSF13BQ9Y275 285 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
PRPF38B-202ENST00000370022 C9IYK1 514 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 KIF20AO95235 890 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 MYBP10242 640 aa17.05■□□□□ 0.32
PRPF38B-202ENST00000370022 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms