RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 DBF4BQ8NFT6 615 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 NOC3LQ8WTT2 800 aaKnown RBP9.72□□□□□ -0.85
SNX27-201ENST00000368838 ATP6V0A1Q93050 837 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
SNX27-201ENST00000368838 HSD3B7Q9H2F3 369 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 TUT1Q9H6E5 874 aaKnown RBP9.72□□□□□ -0.85
SNX27-201ENST00000368838 SUGCTQ9HAC7 445 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 ANKEF1Q9NU02 776 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 SETD4Q9NVD3 440 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 KCNG1Q9UIX4 513 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 PLXNA4Q9HCM2 1894 aa9.71□□□□□ -0.85
SNX27-201ENST00000368838 IGKV6D-21A0A0A0MT36 114 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 BICDL2A1A5D9 508 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 LINC01553A4QN01 128 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 MYMKA6NI61 221 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 RSPH10B2B2RC85 870 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 EML1O00423 815 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 GJB5O95377 273 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 TPM3P06753 285 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 RSPH10BP0C881 870 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 HOXD8P13378 290 aaPredicted RBP9.71□□□□□ -0.86
SNX27-201ENST00000368838 GAP43P17677 238 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 CYP11B2P19099 503 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 QARSP47897 775 aaKnown RBP9.71□□□□□ -0.86
SNX27-201ENST00000368838 SPAG1Q07617 926 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 RBL2Q08999 1139 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 ITGB3BPQ13352 177 aaPredicted RBP9.71□□□□□ -0.86
SNX27-201ENST00000368838 STIM1Q13586 685 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 NEDD9Q14511 834 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 KMT5BQ4FZB7 885 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 CDKAL1Q5VV42 579 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 CENPPQ6IPU0 288 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 KCNK18Q7Z418 384 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 SERINC5Q86VE9 423 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 C17orf80Q9BSJ5 609 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 UNC45AQ9H3U1 944 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 C17orf75Q9HAS0 396 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 PCDHA10Q9Y5I2 948 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 TTC3P53804 2025 aa9.71□□□□□ -0.86
SNX27-201ENST00000368838 ABHD14A-ACY1A0A1B0GW23 586 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 POTEB3A0JP26 581 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 PSMA7O14818 248 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 POU3F3P20264 500 aaPredicted RBP9.7□□□□□ -0.86
SNX27-201ENST00000368838 CCNE1P24864 410 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 MARK3P27448 753 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 ABCD1P33897 745 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 MCCD1P59942 119 aaPredicted RBP9.7□□□□□ -0.86
SNX27-201ENST00000368838 PSMC5P62195 406 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 LRRC63Q05C16 580 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 NFIL3Q16649 462 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 BMT2Q1RMZ1 405 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 POTEBQ6S5H4 581 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 C1orf186Q6ZWK4 172 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 CCDC65Q8IXS2 484 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 ZBTB10Q96DT7 871 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 MED15Q96RN5 788 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 RAD9AQ99638 391 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 GPR20Q99678 358 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 ST6GALNAC4Q9H4F1 302 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 PCDHA2Q9Y5H9 948 aa9.7□□□□□ -0.86
SNX27-201ENST00000368838 FNDC1Q4ZHG4 1894 aaPredicted RBP9.69□□□□□ -0.86
SNX27-201ENST00000368838 BIN1O00499 593 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 CBFA2T2O43439 604 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ATP9AO75110 1047 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 CSPG5O95196 566 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ADCY5O95622 1261 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 AMHP03971 560 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 SLC26A2P50443 739 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
SNX27-201ENST00000368838 ASIC1P78348 528 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 PAK1Q13153 545 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ALCAMQ13740 583 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 PLEKHG4Q58EX7 1191 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 NCAPH2Q6IBW4 605 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 METTL7BQ6UX53 244 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ABHD15Q6UXT9 468 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 MIER3Q7Z3K6 550 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ZC3H3Q8IXZ2 948 aaKnown RBP9.69□□□□□ -0.86
SNX27-201ENST00000368838 GRAMD1CQ8IYS0 662 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 BANK1Q8NDB2 785 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 LMBR1Q8WVP7 490 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ERCC4Q92889 916 aaPredicted RBP9.69□□□□□ -0.86
SNX27-201ENST00000368838 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNX27-201ENST00000368838 HLA-CQ95604 372 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 TGS1Q96RS0 853 aaKnown RBP9.69□□□□□ -0.86
SNX27-201ENST00000368838 TRAIPQ9BWF2 469 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 ADAM33Q9BZ11 813 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 BLZF1Q9H2G9 400 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 EXOC1Q9NV70 894 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 IMPACTQ9P2X3 320 aa9.69□□□□□ -0.86
SNX27-201ENST00000368838 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms