RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SREBF1P36956 1147 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PMS2P54278 862 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 IL9RQ01113 521 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 BYSLQ13895 437 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEGQ6S5H5 508 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEEQ6S8J3 1075 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRIM59Q8IWR1 403 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCT6BQ92526 530 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 HAUS8Q9BT25 410 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PFDN4Q9NQP4 134 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARHGAP20Q9P2F6 1191 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 UVRAGQ9P2Y5 699 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYH8P13535 1937 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 DYTNA2CJ06 578 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF185O15231 689 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SERPINI2O75830 405 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PADI6Q6TGC4 694 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PRPF38AQ8NAV1 312 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GMCL1P1Q8NEA9 526 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PIP4K2CQ8TBX8 421 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 REEP2Q9BRK0 252 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 APEX2Q9UBZ4 518 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRIM10Q9UDY6 481 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ATP8A1Q9Y2Q0 1164 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 NOC2LQ9Y3T9 749 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 BTNL10A8MVZ5 291 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PPP1R37O75864 691 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MDH1P40925 334 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PLTPP55058 493 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KCNQ4P56696 695 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 HYIQ5T013 277 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 GJC2Q5T442 439 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRPC6Q9Y210 931 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARHGEF9O43307 516 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 FGGP02679 453 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MARSP56192 900 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 STYK1Q6J9G0 422 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 XRRA1Q6P2D8 792 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TEX9Q8N6V9 391 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 GRAMD1AQ96CP6 724 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZDHHC15Q96MV8 337 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PNKPQ96T60 521 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 FOXP3Q9BZS1 431 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 OLFML3Q9NRN5 406 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ECE2O60344 883 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 CEP55Q53EZ4 464 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT39Q6A163 491 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 CATSPER3Q86XQ3 398 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF677Q86XU0 584 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KIAA2013Q8IYS2 634 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TTC16Q8NEE8 873 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MKL1Q969V6 931 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 AP1M1Q9BXS5 423 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ROPN1BQ9BZX4 212 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ROPN1Q9HAT0 212 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PRDM4Q9UKN5 801 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 SRRM3A6NNA2 597 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 RPS6KA5O75582 802 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 BFSP1Q12934 665 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KDM7AQ6ZMT4 941 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 SCYL3Q8IZE3 742 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 CEP170P1Q96L14 293 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 VPS37BQ9H9H4 285 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 AFDNP55196 1824 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 NCK2O43639 380 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC37A4O43826 429 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCDC159P0C7I6 412 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 NEK2P51955 445 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 POLGP54098 1239 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PSMC5P62195 406 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 NR1H3Q13133 447 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 NBPF20Q3BBV1 942 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 BRDTQ58F21 947 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MEI1Q5TIA1 1274 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRIML2Q8N7C3 387 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KCNV2Q8TDN2 545 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM151AQ8WW52 585 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 C17orf75Q9HAS0 396 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 DONSONQ9NYP3 566 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 SIK3Q9Y2K2 1263 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT75O95678 551 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 FMO5P49326 533 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TAP1Q03518 808 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MTMR1Q13613 665 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TTC13Q8NBP0 860 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 RBM41Q96IZ5 413 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TTC25Q96NG3 672 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 UIMC1Q96RL1 719 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 EPN3Q9H201 632 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PCIF1Q9H4Z3 704 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARFGEF2Q9Y6D5 1785 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 RASGRF2O14827 1237 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 MED7O43513 233 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 NDUFB10O96000 172 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 TBXAS1P24557 533 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 KLRC1P26715 233 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PMS1P54277 932 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 CYFIP1Q7L576 1253 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 GPIHBP1Q8IV16 184 aa5.73□□□□□ -1.49
CDC42BPA-204ENST00000366767 PPP4R1Q8TF05 950 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms