RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CCZ1BP86790 482 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 RNPC3Q96LT9 517 aaKnown RBP12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
CDC42BPA-203ENST00000366766 A0A087WWV3 80 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 CTTNQ14247 550 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TAF11Q15544 211 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 SPOPLQ6IQ16 392 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TMPRSS15P98073 1019 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 EPHA7Q15375 998 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TRIM49BA6NDI0 452 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 NFRKBQ6P4R8 1299 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TBK1Q9UHD2 729 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 ANGPTL3Q9Y5C1 460 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 CLGNO14967 610 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 FAM47CQ5HY64 1035 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 KRT80Q6KB66 452 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 EIF2AK1Q9BQI3 630 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 ARHGAP18Q8N392 663 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 PCDHA10Q9Y5I2 948 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TOM1L1O75674 476 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 TTLL4Q14679 1199 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 E4F1Q66K89 784 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 MOXD1Q6UVY6 613 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 SAMD3Q8N6K7 520 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 HSPA9P38646 679 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 SLCO1A2P46721 670 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 AP2B1P63010 937 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
CDC42BPA-203ENST00000366766 EIF2AK2P19525 551 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 TTC19Q6DKK2 380 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 TRIM59Q8IWR1 403 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 MXD4Q14582 209 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 TKFCQ3LXA3 575 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 MTMR4Q9NYA4 1195 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 GNA15P30679 374 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 C16orf86Q6ZW13 317 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 PIGOQ8TEQ8 1089 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 WDR24Q96S15 920 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 SLC8A2Q9UPR5 921 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 FTLP02792 175 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 PPP2R5CQ13362 524 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 MAPRE2Q15555 327 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 HIF1AQ16665 826 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 P3H1Q32P28 736 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 RIMS1Q86UR5 1692 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 JPH1Q9HDC5 661 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 TRADDQ15628 312 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 FIGNQ5HY92 759 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 DENND3A2RUS2 1198 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 STXBP3O00186 592 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 ARID5BQ14865 1188 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 SLC9A2Q9UBY0 812 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 RCOR2Q8IZ40 523 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 SPDL1Q96EA4 605 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 MMP10P09238 476 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 NAB2Q15742 525 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
CDC42BPA-203ENST00000366766 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms