RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 WNT6Q9Y6F9 365 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 ANTXRLA6NF34 631 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 MARCH11A6NNE9 402 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 SOCS2O14508 198 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 HOXA3O43365 443 aaPredicted RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 SOCS5O75159 536 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CDKL5O76039 1030 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 TOX4O94842 621 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CAMTA2O94983 1202 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CAPNS1P04632 268 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 T-ENOLP0DO92 83 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 VSIG10L2P0DP72 767 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 SFPQP23246 707 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CERS1P27544 350 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 MC4RP32245 332 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 LTBRP36941 435 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 SESN2P58004 480 aaPredicted RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 NHLH2Q02577 135 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 TSTD2Q5T7W7 516 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 BTBD8Q5XKL5 378 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 POMZP3Q6PJE2 187 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 RUFY4Q6ZNE9 571 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 C9orf47Q6ZRZ4 202 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 NR2C2APQ86WQ0 139 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CMTM4Q8IZR5 234 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 NRACQ8N912 160 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 GLB1L3Q8NCI6 653 aaPredicted RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 DDX17Q92841 729 aaKnown RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 NKD2Q969F2 451 aaPredicted RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 GFM2Q969S9 779 aaKnown RBP0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 TM9SF2Q99805 663 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 AMNQ9BXJ7 453 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 OR10A5Q9H207 317 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 CASS4Q9NQ75 786 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 UBP1Q9NZI7 540 aa0.7□□□□□ -2.3
RNU6-340P-201ENST00000364005 IGKV6D-41A0A0C4DH26 115 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 FAM90A27PA6NNH2 459 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 DIRC3C9JPN6 131 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 PPP6CO00743 305 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 DNAJC6O75061 913 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 GNAT1P11488 350 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 GUCY2CP25092 1073 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 EIF4A3P38919 411 aaKnown RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 ECI1P42126 302 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 HOXA4Q00056 320 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 SPIRE1Q08AE8 756 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 TESK1Q15569 626 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 KIF26BQ2KJY2 2108 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 MRGPRG-AS1Q2M3A8 158 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 CEP78Q5JTW2 689 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 ACBD5Q5T8D3 534 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 LARP1BQ659C4 914 aaKnown RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 ZNF66Q6ZN08 573 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 FAM83AQ86UY5 434 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 PPIL6Q8IXY8 311 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 ZBTB38Q8NAP3 1195 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 BVESQ8NE79 360 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 ZNF296Q8WUU4 475 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 WBP2Q969T9 261 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 VCPIP1Q96JH7 1222 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 SLITRK1Q96PX8 696 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 PDCD2LQ9BRP1 358 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 AIFM2Q9BRQ8 373 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 GATA5Q9BWX5 397 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 CD244Q9BZW8 370 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 EPC1Q9H2F5 836 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 TRMT13Q9NUP7 481 aaKnown RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 RIC8BQ9NVN3 520 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 KBTBD4Q9NVX7 518 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 BTBD7Q9P203 1132 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 PPARGC1AQ9UBK2 798 aaKnown RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 BIN2Q9UBW5 565 aaPredicted RBP0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 APEX2Q9UBZ4 518 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 MAGEL2Q9UJ55 1249 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 DENND2AQ9ULE3 1009 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 PCDHB10Q9UN67 800 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 FPGT-TNNI3KV9GXZ4 949 aa0.69□□□□□ -2.3
RNU6-340P-201ENST00000364005 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 COL2A1P02458 1487 aaPredicted RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 KCNU1A8MYU2 1149 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 NOP56O00567 594 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 RTL8CO15255 209 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 BAG4O95429 457 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 MPIG6BO95866 241 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 SERPINB2P05120 415 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 JUNP05412 331 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 P4HBP07237 508 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 CTSHP09668 335 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 SPATA31D3P0C874 917 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 CYP2D6P10635 497 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 PTPN1P18031 435 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 RHCEP18577 417 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 AOAHP28039 575 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 CDKN2AP42771 156 aaKnown RBP0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 SOX10P56693 466 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 MXRA7P84157 204 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 SLC7A5Q01650 507 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 APOBRQ0VD83 1088 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 PRSS53Q2L4Q9 553 aa0.68□□□□□ -2.3
RNU6-340P-201ENST00000364005 HABP4Q5JVS0 413 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms