RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TMEM134Q9H6X4 195 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 GRPEL1Q9HAV7 217 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 TYW1Q9NV66 732 aaKnown RBP22.66■■□□□ 1.22
SHISA4-201ENST00000362011 TBX20Q9UMR3 447 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 EXOC7Q9UPT5 735 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 NFE2L3Q9Y4A8 694 aa22.66■■□□□ 1.22
SHISA4-201ENST00000362011 PDXKO00764 312 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 CALUO43852 315 aaPredicted RBP22.65■■□□□ 1.22
SHISA4-201ENST00000362011 EFNA5P52803 228 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 CDC42EP1Q00587 391 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 POU5F1BQ06416 359 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 KCNA1Q09470 495 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 ZCWPW2Q504Y3 356 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 CDCA2Q69YH5 1023 aaPredicted RBP22.65■■□□□ 1.22
SHISA4-201ENST00000362011 TAF2Q6P1X5 1199 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 SYCP3Q8IZU3 236 aa22.65■■□□□ 1.22
SHISA4-201ENST00000362011 TRIM43BA6NCK2 446 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 PHKA2P46019 1235 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 STRN3Q13033 797 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 ZNF410Q86VK4 478 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 MAP4K3Q8IVH8 894 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 DNAJB3Q8WWF6 145 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 BADQ92934 168 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 TRIM43Q96BQ3 446 aaPredicted RBP22.64■■□□□ 1.22
SHISA4-201ENST00000362011 DUSP9Q99956 384 aaKnown RBP22.64■■□□□ 1.22
SHISA4-201ENST00000362011 SEZ6LQ9BYH1 1024 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 TRAF3IP3Q9Y228 551 aa22.64■■□□□ 1.22
SHISA4-201ENST00000362011 K7ERI5 159 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 RPLP2P05387 115 aaKnown RBP22.63■■□□□ 1.21
SHISA4-201ENST00000362011 GPC3P51654 580 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 PTENP60484 403 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 SMAD3P84022 425 aaKnown RBP22.63■■□□□ 1.21
SHISA4-201ENST00000362011 EDRF1Q3B7T1 1238 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 HS2ST1Q7LGA3 356 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 TAS1R3Q7RTX0 852 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 IFNLR1Q8IU57 520 aaPredicted RBP22.63■■□□□ 1.21
SHISA4-201ENST00000362011 NME8Q8N427 588 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 CSGALNACT2Q8N6G5 542 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 NOC3LQ8WTT2 800 aaKnown RBP22.63■■□□□ 1.21
SHISA4-201ENST00000362011 ZNF668Q96K58 619 aaPredicted RBP22.63■■□□□ 1.21
SHISA4-201ENST00000362011 FAM161BQ96MY7 647 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 SCLT1Q96NL6 688 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 NFKBIZQ9BYH8 718 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 GBP3Q9H0R5 595 aa22.63■■□□□ 1.21
SHISA4-201ENST00000362011 A0A087WZ62 844 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 FGFR1OPO95684 399 aaKnown RBP22.62■■□□□ 1.21
SHISA4-201ENST00000362011 MRE11P49959 708 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 NLRP11P59045 1033 aaKnown RBP22.62■■□□□ 1.21
SHISA4-201ENST00000362011 PTGISQ16647 500 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 RSPH3Q86UC2 560 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 SERINC5Q86VE9 423 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 ZNF710Q8N1W2 664 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 SLC43A3Q8NBI5 491 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 GOLGA5Q8TBA6 731 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 NLRP7Q8WX94 980 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 PPP1R16BQ96T49 567 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 CDX2Q99626 313 aaPredicted RBP22.62■■□□□ 1.21
SHISA4-201ENST00000362011 FDXACB1Q9BRP7 624 aaPredicted RBP22.62■■□□□ 1.21
SHISA4-201ENST00000362011 CCDC113Q9H0I3 377 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 FANCLQ9NW38 375 aa22.62■■□□□ 1.21
SHISA4-201ENST00000362011 CGNQ9P2M7 1197 aaKnown RBP22.62■■□□□ 1.21
SHISA4-201ENST00000362011 ARVCFO00192 962 aa22.61■■□□□ 1.21
SHISA4-201ENST00000362011 TGFB1I1O43294 461 aa22.61■■□□□ 1.21
SHISA4-201ENST00000362011 SNRPFP62306 86 aaKnown RBP22.61■■□□□ 1.21
SHISA4-201ENST00000362011 BICD1Q96G01 975 aa22.61■■□□□ 1.21
SHISA4-201ENST00000362011 SRRTQ9BXP5 876 aaKnown RBP22.61■■□□□ 1.21
SHISA4-201ENST00000362011 THAP9Q9H5L6 903 aa22.61■■□□□ 1.21
SHISA4-201ENST00000362011 EYSQ5T1H1 3165 aa22.61■■□□□ 1.21
SHISA4-201ENST00000362011 PRKCBP05771 671 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 FKBP3Q00688 224 aaKnown RBP22.6■■□□□ 1.21
SHISA4-201ENST00000362011 NFIL3Q16649 462 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 MAPK6Q16659 721 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 SRGAP1Q7Z6B7 1085 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 IKZF4Q9H2S9 585 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 IFT122Q9HBG6 1241 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 PRDM5Q9NQX1 630 aaPredicted RBP22.6■■□□□ 1.21
SHISA4-201ENST00000362011 SAMSN1Q9NSI8 373 aaKnown RBP22.6■■□□□ 1.21
SHISA4-201ENST00000362011 NOD1Q9Y239 953 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 ANK1P16157 1881 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 TANC1Q9C0D5 1861 aa22.6■■□□□ 1.21
SHISA4-201ENST00000362011 INO80B-WBP1J3KQ70 363 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 M0QZ92 97 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 GPR32O75388 356 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 PIGRP01833 764 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 ITGB8P26012 769 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 RPL13P26373 211 aaKnown RBP22.59■■□□□ 1.21
SHISA4-201ENST00000362011 TLE2Q04725 743 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 TMEM62Q0P6H9 643 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 PTK7Q13308 1070 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 KIZQ2M2Z5 673 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 FAM114A1Q8IWE2 563 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 ZC3H3Q8IXZ2 948 aaKnown RBP22.59■■□□□ 1.21
SHISA4-201ENST00000362011 CEP63Q96MT8 703 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 GCOM2Q9BZD3 368 aaPredicted RBP22.59■■□□□ 1.21
SHISA4-201ENST00000362011 INO80BQ9C086 356 aaPredicted RBP22.59■■□□□ 1.21
SHISA4-201ENST00000362011 HSD3B7Q9H2F3 369 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 TTYH1Q9H313 450 aaPredicted RBP22.59■■□□□ 1.21
SHISA4-201ENST00000362011 ADAMTS10Q9H324 1103 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 AGPAT3Q9NRZ7 376 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 CITO14578 2027 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms