RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MFSD1Q9H3U5 465 aa23.64■■□□□ 1.37
CD47-202ENST00000361309 RSAD1Q9HA92 442 aa23.64■■□□□ 1.37
CD47-202ENST00000361309 MTCL1Q9Y4B5 1905 aaKnown RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 PROB1E7EW31 1015 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 CPLX1O14810 134 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 QARSP47897 775 aaKnown RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 CLCN4P51793 760 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 MRPL10Q7Z7H8 261 aaKnown RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 SLC7A3Q8WY07 619 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 ACSF2Q96CM8 615 aaPredicted RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 SNX27Q96L92 541 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 FAM193BQ96PV7 902 aaPredicted RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 LARP6Q9BRS8 491 aaKnown RBP23.63■■□□□ 1.37
CD47-202ENST00000361309 MINDY3Q9H8M7 445 aa23.63■■□□□ 1.37
CD47-202ENST00000361309 ALDH2P05091 517 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 CNPP09543 421 aaKnown RBP23.62■■□□□ 1.37
CD47-202ENST00000361309 SRGAP2CP0DJJ0 459 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 PPP2R5CQ13362 524 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 LETM2Q2VYF4 491 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 GALNT17Q6IS24 598 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 CCDC149Q6ZUS6 474 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 SRGAP1Q7Z6B7 1085 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 PRPF31Q8WWY3 499 aaKnown RBP23.62■■□□□ 1.37
CD47-202ENST00000361309 TMEM143Q96AN5 459 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 CEP170P1Q96L14 293 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 SLKQ9H2G2 1235 aaPredicted RBP23.62■■□□□ 1.37
CD47-202ENST00000361309 ZSWIM6Q9HCJ5 1215 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 WRAP73Q9P2S5 460 aaPredicted RBP23.62■■□□□ 1.37
CD47-202ENST00000361309 STK39Q9UEW8 545 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 VAV3Q9UKW4 847 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 FAN1Q9Y2M0 1017 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 WDR87Q6ZQQ6 2873 aa23.62■■□□□ 1.37
CD47-202ENST00000361309 NRP1O14786 923 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 LILRB3O75022 631 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 REC8O95072 547 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 POMCP01189 267 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 HOXA11P31270 313 aaPredicted RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 CLCN5P51795 746 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 UBXN11Q5T124 520 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 OTOP3Q7RTS5 596 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 ASCL5Q7RTU5 278 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 KRT25Q7Z3Z0 450 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 PSPC1Q8WXF1 523 aaKnown RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 ZNF274Q96GC6 653 aaPredicted RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 TMEM175Q9BSA9 504 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 DHX33Q9H6R0 707 aaKnown RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 MRPL17Q9NRX2 175 aaKnown RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 BMP2KQ9NSY1 1161 aaPredicted RBP23.61■■□□□ 1.37
CD47-202ENST00000361309 KANSL3Q9P2N6 904 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 KCNJ14Q9UNX9 436 aa23.61■■□□□ 1.37
CD47-202ENST00000361309 CNTNAP2Q9UHC6 1331 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 DOCK8Q8NF50 2099 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 DKC1O60832 514 aaKnown RBP eCLIP23.6■■□□□ 1.37
CD47-202ENST00000361309 P4HBP07237 508 aaKnown RBP23.6■■□□□ 1.37
CD47-202ENST00000361309 NBL1P41271 181 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 LAMTOR4Q0VGL1 99 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 STK3Q13188 491 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 EXOC8Q8IYI6 725 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
CD47-202ENST00000361309 FLCNQ8NFG4 579 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 KCNMB3Q9NPA1 279 aa23.6■■□□□ 1.37
CD47-202ENST00000361309 C2CD2LO14523 706 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 RFC5P40937 340 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 TDGQ13569 410 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 CWF19L1Q69YN2 538 aaKnown RBP23.59■■□□□ 1.37
CD47-202ENST00000361309 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
CD47-202ENST00000361309 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 PPME1Q9Y570 386 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 CYP46A1Q9Y6A2 500 aa23.59■■□□□ 1.37
CD47-202ENST00000361309 PRR23AA6NEV1 266 aa23.58■■□□□ 1.37
CD47-202ENST00000361309 SOD2P04179 222 aa23.58■■□□□ 1.37
CD47-202ENST00000361309 NCLP19338 710 aaKnown RBP23.58■■□□□ 1.37
CD47-202ENST00000361309 C15orf39Q6ZRI6 1047 aa23.58■■□□□ 1.37
CD47-202ENST00000361309 RNF149Q8NC42 400 aa23.58■■□□□ 1.37
CD47-202ENST00000361309 KCNK12Q9HB15 430 aa23.58■■□□□ 1.37
CD47-202ENST00000361309 PRG3Q9Y2Y8 225 aaPredicted RBP23.58■■□□□ 1.37
CD47-202ENST00000361309 CCDC194A0A1B0GVG4 234 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 ITGA4P13612 1032 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 AK2P54819 239 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 PPP4R3AQ6IN85 833 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 TAS1R1Q7RTX1 841 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 NEK8Q86SG6 692 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 FERMT3Q86UX7 667 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 C4orf19Q8IY42 314 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 SMG8Q8ND04 991 aaKnown RBP23.57■■□□□ 1.36
CD47-202ENST00000361309 LXNQ9BS40 222 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 PHF20Q9BVI0 1012 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 MAN1C1Q9NR34 630 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 MARCH5Q9NX47 278 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 RGL1Q9NZL6 768 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 DUSP12Q9UNI6 340 aa23.57■■□□□ 1.36
CD47-202ENST00000361309 ASAP2O43150 1006 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 PI15O43692 258 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 CCNT1O60563 726 aaKnown RBP23.56■■□□□ 1.36
CD47-202ENST00000361309 URODP06132 367 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 NPR3P17342 541 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 YWHABP31946 246 aaKnown RBP23.56■■□□□ 1.36
CD47-202ENST00000361309 OR1G1P47890 313 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 EMC2Q15006 297 aa23.56■■□□□ 1.36
CD47-202ENST00000361309 EPHA7Q15375 998 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms