RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PPTC7Q8NI37 304 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 IFT74Q96LB3 600 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 CHP1Q99653 195 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 STRA6Q9BX79 667 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 ZMYM2Q9UBW7 1377 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 CASP8AP2Q9UKL3 1982 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 CETN3O15182 167 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 KRT86O43790 486 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 LGALS2P05162 132 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNF286BP0CG31 522 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 MAP2K2P36507 400 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 PEX3P56589 373 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 HS2ST1Q7LGA3 356 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 TUBGCP2Q9BSJ2 902 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 KIFC3Q9BVG8 833 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 CFHR5Q9BXR6 569 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 DHX33Q9H6R0 707 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 GUCA1BQ9UMX6 200 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 CCDC169A6NNP5 214 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 TRIM32Q13049 653 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 ADAM9Q13443 819 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 EMC2Q15006 297 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 CCDC170Q8IYT3 715 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 OR6J1Q8NGC5 347 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 GOLGA5Q8TBA6 731 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 TRAPPC12Q8WVT3 735 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 EXOC4Q96A65 974 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 RPGRIP1Q96KN7 1286 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 C16orf70Q9BSU1 422 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 TMEM206Q9H813 350 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 ERAP1Q9NZ08 941 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 MMP3P08254 477 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 RTP1P59025 263 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 DRP2Q13474 957 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 KIF22Q14807 665 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 ATP8B4Q8TF62 1192 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
SQSTM1-201ENST00000360718 SLC16A4O15374 487 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 TGFB1I1O43294 461 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 XRCC5P13010 732 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 NR2F2P24468 414 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ABCD1P33897 745 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 AMPD2Q01433 879 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 CKAP4Q07065 602 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 TBC1D8BQ0IIM8 1120 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 WDR93Q6P2C0 686 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 CD99L2Q8TCZ2 262 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ACCSQ96QU6 501 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 PNKPQ96T60 521 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 NOC4LQ9BVI4 516 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ST6GALNAC4Q9H4F1 302 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ABCB6Q9NP58 842 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 H0YCG3 227 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ABL1P00519 1130 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 NPTX2P47972 431 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 ZBED6P86452 979 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 PPP2R5AQ15172 486 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 MEA1Q16626 185 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 POLR3FQ9H1D9 316 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 EXOC7Q9UPT5 735 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 SAR1BQ9Y6B6 198 aa14.34□□□□□ -0.11
SQSTM1-201ENST00000360718 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 HBP1O60381 514 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 NR3C1P04150 777 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 MAN2A1Q16706 1144 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 FKBP15Q5T1M5 1219 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 TLK2Q86UE8 772 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 ASAP3Q8TDY4 903 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 HVCN1Q96D96 273 aa14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 REXO2Q9Y3B8 237 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-201ENST00000360718 EIF3CLB5ME19 914 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-201ENST00000360718 TISP43B9A030 160 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms