RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 USP17L21D6R901 530 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 BBS7Q8IWZ6 715 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 KCNA2P16389 499 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 GADL1Q6ZQY3 521 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 ACAP3Q96P50 834 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 CDCA7Q9BWT1 371 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 STRNO43815 780 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 MYBL1P10243 752 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 NCALDP61601 193 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 PRAMEP78395 509 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 ZBED8Q8IZ13 594 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 SH3TC2Q8TF17 1288 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 RGL1Q9NZL6 768 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 MAD2L2Q9UI95 211 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 RGS5O15539 181 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 PPCSQ9HAB8 311 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ATXN8OSP0DMR3 200 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ELF1P32519 619 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ARHGEF10O15013 1369 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 POTEFA5A3E0 1075 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 CD58P19256 250 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 WLSQ5T9L3 541 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 FAM45BPQ6NSW5 357 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 HEY1Q9Y5J3 304 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 STX3Q13277 289 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ADRM1Q16186 407 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ZFATQ9P243 1243 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 FASTKD1Q53R41 847 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 FASTKD5Q7L8L6 764 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 DIS3LQ8TF46 1054 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 APOA4P06727 396 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ARHGAP17Q68EM7 881 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 C11orf57Q6ZUT1 292 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 CXorf56Q9H5V9 222 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ITGB1BP2Q9UKP3 347 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ARL6IP4Q66PJ3 421 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 C16orf62Q7Z3J2 963 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 TBXAS1P24557 533 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 KCNQ4P56696 695 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 MTERF3Q96E29 417 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 WNT8AQ9H1J5 351 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 NGRNQ9NPE2 291 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 FARP1Q9Y4F1 1045 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 SNTNA6NMZ2 147 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ZNF197O14709 1029 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 MTRF1O75570 445 aaKnown RBP9.83□□□□□ -0.84
VPS13A-203ENST00000360280 TAP1Q03518 808 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 PPP1R2P1Q96PQ5 205 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 KIAA1586Q9HCI6 787 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 CAPN1P07384 714 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 ABCB5Q2M3G0 1257 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 GANCQ8TET4 914 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 PSMC6P62333 389 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 PDP2Q9P2J9 529 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 E7ENQ6 273 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 H7C0S8 307 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 SPDYE7PQ495Y7 208 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 CEP170P1Q96L14 293 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 NDUFA13Q9P0J0 144 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 PFASO15067 1338 aa9.83□□□□□ -0.84
VPS13A-203ENST00000360280 KRT17Q04695 432 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CC2D1AQ6P1N0 951 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ADAM30Q9UKF2 790 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 APPL1Q9UKG1 709 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 PNMA6EA0A0J9YXQ4 647 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 NNMTP40261 264 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 USP14P54578 494 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 AHI1Q8N157 1196 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MAML3Q96JK9 1138 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 UBAP1Q9NZ09 502 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CLCA2Q9UQC9 943 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 THEM5Q8N1Q8 247 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TMA16Q96EY4 203 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 FAM129AQ9BZQ8 928 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 RHBDL2Q9NX52 303 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ADAM22Q9P0K1 906 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 GRK2P25098 689 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 IDI1Q13907 227 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CDH24Q86UP0 819 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CLEC4MQ9H2X3 399 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 ENO4A6NNW6 628 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 M0R2C6 588 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 TYK2P29597 1187 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 PDIA3P30101 505 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 MLH1P40692 756 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SRPRBQ9Y5M8 271 aaKnown RBP9.82□□□□□ -0.84
VPS13A-203ENST00000360280 CAPZA2P47755 286 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 HPCAP84074 193 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 KDSRQ06136 332 aa9.82□□□□□ -0.84
VPS13A-203ENST00000360280 SYDE1Q6ZW31 735 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms