RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TBX20Q9UMR3 447 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 SYCE3A1L190 88 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 CSDE1O75534 798 aaKnown RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 HOXD13P35453 343 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 PRCPP42785 496 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 KCNA1Q09470 495 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 MBTPS1Q14703 1052 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 GPNMBQ14956 572 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 AMHR2Q16671 573 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 GUF1Q8N442 669 aaKnown RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 TRIM43Q96BQ3 446 aaPredicted RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 PRMT7Q9NVM4 692 aaPredicted RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 NOC2LQ9Y3T9 749 aaKnown RBP13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 UBE4BO95155 1302 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
NIF3L1-201ENST00000359683 ACKR2O00590 384 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 TIMP1P01033 207 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 PRKCBP05771 671 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 CYP2C18P33260 490 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 PPP1R2P41236 205 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 LPIN1Q14693 890 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 PRIMPOLQ96LW4 560 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 ACCSQ96QU6 501 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 GDF15Q99988 308 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 PPP1R12CQ9BZL4 782 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 TMEM206Q9H813 350 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 SZT2Q5T011 3432 aa13.63□□□□□ -0.23
NIF3L1-201ENST00000359683 RPS6KA5O75582 802 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 KIF20AO95235 890 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 PIGRP01833 764 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 EDN1P05305 212 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 ITGB8P26012 769 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 TYRO3Q06418 890 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 STRN3Q13033 797 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 KNOP1Q1ED39 458 aaKnown RBP13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 DPCR1Q3MIW9 517 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 FAM228AQ86W67 206 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 LRCH3Q96II8 777 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 ANO10Q9NW15 660 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 SIP14410 1827 aa13.62□□□□□ -0.23
NIF3L1-201ENST00000359683 TTLL13PA6NNM8 815 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 GPR182O15218 404 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 NBNO60934 754 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CCDC192P0DO97 292 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 GHRP10912 638 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 FGFR4P22455 802 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CCL23P55773 120 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CT47A1Q5JQC4 288 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CENPPQ6IPU0 288 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 TSHZ1Q6ZSZ6 1077 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CATSPER4Q7RTX7 472 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 DHTKD1Q96HY7 919 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ERVK-5Q9HDB9 667 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ST3GAL5Q9UNP4 418 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 LTBP2Q14767 1821 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 B4GALT5O43286 388 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 TGFB1I1O43294 461 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 TSPAN1O60635 241 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 CXCL10P02778 98 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 RAG1P15918 1043 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ARF4P18085 180 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 AXLP30530 894 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 HOXA11P31270 313 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 BMP8BP34820 402 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 PRPF4BQ13523 1007 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 STIM1Q13586 685 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 STX1AQ16623 288 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 FAM43BQ6ZT52 329 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 SCLYQ96I15 445 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ACO2Q99798 780 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 SEMA6BQ9H3T3 888 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms