RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 FZD8Q9H461 694 aa27.24■■□□□ 1.95
SHARPIN-201ENST00000359551 STYXL1Q9Y6J8 313 aa27.24■■□□□ 1.95
SHARPIN-201ENST00000359551 A0A087WZ62 844 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 HNRNPDLO14979 420 aaKnown RBP27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 AKAP3O75969 853 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 ADSSP30520 456 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 MBTD1Q05BQ5 628 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 MTFR1Q15390 333 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 MAPK6Q16659 721 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 TAF2Q6P1X5 1199 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 FBXO46Q6PJ61 603 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 FRMD5Q7Z6J6 570 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 FDXACB1Q9BRP7 624 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 CBWD1Q9BRT8 395 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 RTN4Q9NQC3 1192 aaKnown RBP27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 TAB2Q9NYJ8 693 aa27.23■■□□□ 1.95
SHARPIN-201ENST00000359551 EDN1P05305 212 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 GARTP22102 1010 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 PTPN11Q06124 597 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 FILIP1LQ4L180 1135 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 GDF6Q6KF10 455 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 ARMCX5Q6P1M9 558 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 ZPBP2Q6X784 338 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 ZNF710Q8N1W2 664 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 FAM49AQ9H0Q0 323 aaPredicted RBP27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 ADAMTS10Q9H324 1103 aa27.22■■□□□ 1.95
SHARPIN-201ENST00000359551 TPM3P06753 285 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CCL5P13501 91 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 MTIF2P46199 727 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CASP4P49662 377 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CTCFP49711 727 aaPredicted RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 NLRP11P59045 1033 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 FAM187BQ17R55 369 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CCDC40Q4G0X9 1142 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CREBRFQ8IUR6 639 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 TRIM59Q8IWR1 403 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 GLT1D1Q96MS3 346 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 PHF24Q9UPV7 400 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 ACKR2O00590 384 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 GPR32O75388 356 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 PRKCBP05771 671 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 HSPA1AP0DMV8 641 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 HSPA1BP0DMV9 641 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 PSMC2P35998 433 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 LIG4P49917 911 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 CYP2J2P51589 502 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 LBX1P52954 281 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 PKN2Q16513 984 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 MAN2A1Q16706 1144 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 NME8Q8N427 588 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 DNAJB3Q8WWF6 145 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 BICD1Q96G01 975 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 BORCS6Q96GS4 357 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 ZNF668Q96K58 619 aaPredicted RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 MRPL4Q9BYD3 311 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 MINDY3Q9H8M7 445 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 METTL14Q9HCE5 456 aaKnown RBP27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 HSPBP1Q9NZL4 362 aa27.21■■□□□ 1.95
SHARPIN-201ENST00000359551 N4BP3O15049 544 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 EPB41P11171 864 aaKnown RBP27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 ITGA7Q13683 1181 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 MIIPQ5JXC2 388 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 CEP135Q66GS9 1140 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 SRGAP1Q7Z6B7 1085 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 XXYLT1Q8NBI6 393 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 TARS2Q9BW92 718 aaKnown RBP27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 VPS16Q9H269 839 aa27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 PRMT7Q9NVM4 692 aaPredicted RBP27.2■■□□□ 1.94
SHARPIN-201ENST00000359551 LGALS16A8MUM7 142 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 INO80B-WBP1J3KQ70 363 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 MAPK13O15264 365 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 FAM47CQ5HY64 1035 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 SERINC5Q86VE9 423 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 NLRP7Q8WX94 980 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 INO80BQ9C086 356 aaPredicted RBP27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 RNF208Q9H0X6 261 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 OGDHLQ9ULD0 1010 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 FRMD4BQ9Y2L6 1034 aa27.19■■□□□ 1.94
SHARPIN-201ENST00000359551 A0A1W2PQ45 241 aaPredicted RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 A0A1W2PQY0 241 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 DNM1LO00429 736 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 KIAA0391O15091 583 aaKnown RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 EXOC3O60645 756 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 PRKCSHP14314 528 aaPredicted RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 SLFN12LQ6IEE8 588 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 RPAINQ86UA6 219 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 SLC43A3Q8NBI5 491 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 PRIMPOLQ96LW4 560 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 FBXL18Q96ME1 805 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 DEFB118Q96PH6 123 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 ACO2Q99798 780 aaKnown RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 NOC4LQ9BVI4 516 aaKnown RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 PCIF1Q9H4Z3 704 aa27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 ARMCX3Q9UH62 379 aaPredicted RBP27.18■■□□□ 1.94
SHARPIN-201ENST00000359551 KBTBD13C9JR72 458 aa27.17■■□□□ 1.94
SHARPIN-201ENST00000359551 TEX33O43247 280 aa27.17■■□□□ 1.94
SHARPIN-201ENST00000359551 RPLP2P05387 115 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-201ENST00000359551 TPM2P07951 284 aa27.17■■□□□ 1.94
SHARPIN-201ENST00000359551 IQCF3P0C7M6 154 aa27.17■■□□□ 1.94
SHARPIN-201ENST00000359551 AMHR2Q16671 573 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms