RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 EML1O00423 815 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 MSH4O15457 936 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 PHF2O75151 1096 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ANP32DO95626 131 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ATP6V1G2O95670 118 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 FAM86B2P0C5J1 330 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM253P0C7T8 217 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 POTEJP0CG39 1038 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 BMP3P12645 472 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 GAP43P17677 238 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 RINT1Q6NUQ1 792 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF572Q7Z3I7 529 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SLC17A8Q8NDX2 589 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.06□□□□□ -1.281e-7■■■■□ 24.2
CSDE1-203ENST00000358528 KAT5Q92993 513 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TRIM6Q9C030 488 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 NOP53Q9NZM5 478 aaKnown RBP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TRIM33Q9UPN9 1127 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSDE1-203ENST00000358528 TAF1P21675 1872 aa7.06□□□□□ -1.28
CSDE1-203ENST00000358528 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 TCP10L2B9ZVM9 353 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 RASA4BC9J798 803 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 GOLGA8SH3BPF8 625 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 GOLGA8MH3BSY2 632 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 PODXLO00592 558 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 RASA4O43374 803 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 SLC12A3P55017 1021 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 PEX3P56589 373 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 RWDD2BP57060 319 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 PTENP60484 403 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 KCNJ2P63252 427 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 LMBRD2Q68DH5 695 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 CPNE8Q86YQ8 564 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 RNF25Q96BH1 459 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 INTUQ9ULD6 942 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF148Q9UQR1 794 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 NUP188Q5SRE5 1749 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 SLC16A4O15374 487 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 EYA4O95677 639 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ALDH3A1P30838 453 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ELF3P78545 371 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 DHX34Q14147 1143 aaKnown RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 DPH6Q7L8W6 267 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 CROCCP2Q86T23 111 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 FMNL3Q8IVF7 1028 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ZFPM1Q8IX07 1006 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 LRRC57Q8N9N7 239 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 TBC1D16Q8TBP0 767 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 KIFAP3Q92845 792 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 CARD9Q9H257 536 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 POLLQ9UGP5 575 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 SLC12A6Q9UHW9 1150 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 TRPC6Q9Y210 931 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 PKD1L3Q7Z443 1732 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 TCRBV7S2A1N4TA0A589 114 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 CLRN2A0PK11 232 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ENO4A6NNW6 628 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 SGPL1O95470 568 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 AGTP01019 485 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 FOSP01100 380 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 POLR2MP0CAP2 368 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 PYGMP11217 842 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 CREB1P16220 341 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 TNNI1P19237 187 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 VAMP7P51809 220 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 SPATA21Q7Z572 469 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 YTHDF3Q7Z739 585 aaKnown RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 FAM84AQ96KN4 292 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ALG13Q9NP73 1137 aaKnown RBP7.05□□□□□ -1.28
CSDE1-203ENST00000358528 LRP6O75581 1613 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 MYO3BQ8WXR4 1341 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 ECM29Q5VYK3 1845 aa7.05□□□□□ -1.28
CSDE1-203ENST00000358528 EXOC1LA0A1B0GW35 172 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PI4K2BG5E9Z4 385 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 UPP2O95045 317 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CA4P22748 312 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 RHBDL3P58872 404 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 DYNLT1P63172 113 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 BFSP1Q12934 665 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PLCB4Q15147 1175 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 XKR9Q5GH70 373 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 SLC10A5Q5PT55 438 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 ERMARDQ5T6L9 678 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 DAB2IPQ5VWQ8 1189 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PPP1R18Q6NYC8 613 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 C4orf33Q8N1A6 199 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 SUPT20HQ8NEM7 779 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 LXNQ9BS40 222 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CDC42EP4Q9H3Q1 356 aaKnown RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 DCTN4Q9UJW0 460 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 SERPINA10Q9UK55 444 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 ASTN1O14525 1302 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 PITPNM2Q9BZ72 1349 aa7.04□□□□□ -1.28
CSDE1-203ENST00000358528 CICQ96RK0 1608 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-203ENST00000358528 A8MUI8 341 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms