RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 EDEM3Q9BZQ6 932 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ISCUQ9H1K1 167 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 LRCH1Q9Y2L9 728 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 IQGAP1P46940 1657 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 GCP02774 474 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 NT5C2P49902 561 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 SLC18A3Q16572 532 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 LRRC8EQ6NSJ5 796 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CCNYQ8ND76 341 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 RBM17Q96I25 401 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 GGA1Q9UJY5 639 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 NR3C1P04150 777 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 PDIA2Q13087 525 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ORC4O43929 436 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 MYBL1P10243 752 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 VCPP55072 806 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 NOD1Q9Y239 953 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CLTCL1P53675 1640 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 INO80Q9ULG1 1556 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ADGRA3Q8IWK6 1321 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PMLP29590 882 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 HSD17B3P37058 310 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GRIN1Q05586 938 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 MRPL1Q9BYD6 325 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SUCLA2Q9P2R7 463 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 TTC7AQ9ULT0 858 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 C15orf41Q9Y2V0 281 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 CAB39Q9Y376 341 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 TBC1D4O60343 1298 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PDHBP11177 359 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ATP6V1B1P15313 513 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 KCNB1Q14721 858 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 KYNUQ16719 465 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SNRNP27Q8WVK2 155 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 NSL1Q96IY1 281 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 FOXP3Q9BZS1 431 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ADD3Q9UEY8 706 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 LRRIQ4A6NIV6 560 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 LIMA1Q9UHB6 759 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 MRPL11Q9Y3B7 192 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ASAP2O43150 1006 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 KLHL2O95198 593 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GYPCP04921 128 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ARHGEF16Q5VV41 709 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 UTP6Q9NYH9 597 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GTSE1Q9NYZ3 720 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ZSWIM5Q9P217 1185 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 MKL2Q9ULH7 1088 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 AURKCQ9UQB9 309 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 FSBPO95073 299 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PRPF38AQ8NAV1 312 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ARL8AQ96BM9 186 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 BRD8Q9H0E9 1235 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 WDR47O94967 919 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 LONRF1Q17RB8 773 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SHC4Q6S5L8 630 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 MED10Q9BTT4 135 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF608Q9ULD9 1512 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 SSU72P8A0A1W2PR75 194 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 HNRNPRO43390 633 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 IZUMO3Q5VZ72 239 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 FAM180AQ6UWF9 173 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 BTNL9Q6UXG8 535 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 GPR141Q7Z602 305 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PRPF39Q86UA1 669 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 CHP1Q99653 195 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 PARVBQ9HBI1 364 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ATXN2Q99700 1313 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 ATP10AO60312 1499 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 CHURC1Q8WUH1 139 aa9.29□□□□□ -0.92
COL6A6-201ENST00000358511 EML4Q9HC35 981 aaKnown RBP9.29□□□□□ -0.92
COL6A6-201ENST00000358511 LRRC24Q50LG9 513 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 CCDC103Q8IW40 242 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF513Q8N8E2 541 aaPredicted RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 SPATA17Q96L03 361 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TEX12Q9BXU0 123 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 CNOT8Q9UFF9 292 aaKnown RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 NINQ8N4C6 2090 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 M0R3G1 203 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 SEC24DO94855 1032 aaPredicted RBP9.28□□□□□ -0.92
COL6A6-201ENST00000358511 TTLL1O95922 423 aa9.28□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF211Q13398 564 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms