RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PDXDC2PQ6P474 469 aa13.62□□□□□ -0.23
SMC4-202ENST00000357388 ULK4Q96C45 1275 aa13.62□□□□□ -0.23
SMC4-202ENST00000357388 CNGB3Q9NQW8 809 aa13.62□□□□□ -0.23
SMC4-202ENST00000357388 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
SMC4-202ENST00000357388 SEL1LQ9UBV2 794 aa13.62□□□□□ -0.23
SMC4-202ENST00000357388 MARK3P27448 753 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 VHLP40337 213 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 CDKL3Q8IVW4 592 aaPredicted RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 TMEM245Q9H330 911 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 CYP4F11Q9HBI6 524 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 NXF1Q9UBU9 619 aaKnown RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 NAALADL2Q58DX5 795 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 EXT2Q93063 718 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 EAF2Q96CJ1 260 aaPredicted RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 EDEM3Q9BZQ6 932 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 TOPORSQ9NS56 1045 aaPredicted RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 AP3B1O00203 1094 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 NUP107P57740 925 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 MTERF2Q49AM1 385 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 ANKRD27Q96NW4 1050 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 CCT8L2Q96SF2 557 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 PLA2G4BP0C869 781 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 CDC27P30260 824 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 DMC1Q14565 340 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 CCT7Q99832 543 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
SMC4-202ENST00000357388 MTO1Q9Y2Z2 717 aaKnown RBP13.61□□□□□ -0.23
SMC4-202ENST00000357388 LZTS3O60299 673 aaPredicted RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 BLVRAP53004 296 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 TMEM35BQ8NCS4 154 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 FOXP3Q9BZS1 431 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 RUBCNLQ9H714 662 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 FBXL5Q9UKA1 691 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 CLIC2O15247 247 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 CATSPER4Q7RTX7 472 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 DTX3LQ8TDB6 740 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 CASP10Q92851 521 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 ZMYND8Q9ULU4 1186 aaPredicted RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 ANGPT2O15123 496 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 KRT7P08729 469 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 MTHFD1LQ6UB35 978 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 RRM2BQ7LG56 351 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 EME1Q96AY2 570 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 KLHL8Q9P2G9 620 aaPredicted RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 CORO7P57737 925 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.6□□□□□ -0.237e-6■■■□□ 17.7
SMC4-202ENST00000357388 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 TLK2Q86UE8 772 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 CCNYL1Q8N7R7 359 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 COA7Q96BR5 231 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
SMC4-202ENST00000357388 ADAM22Q9P0K1 906 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 IP6K2Q9UHH9 426 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 STRNO43815 780 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 COBLO75128 1261 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 PLCG1P19174 1290 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 HADHAP40939 763 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 TTC23LQ6PF05 361 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 NUDT18Q6ZVK8 323 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 GREM2Q9H772 168 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 ZWILCHQ9H900 591 aa13.6□□□□□ -0.23
SMC4-202ENST00000357388 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 AASDHQ4L235 1098 aaPredicted RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 HSPH1Q92598 858 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 CCDC195A0A1B0GUA6 201 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 IQCA1LA6NCM1 817 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 SH2B2O14492 632 aaPredicted RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 ATP1A3P13637 1013 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TAP1Q03518 808 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 KCTD1Q719H9 257 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 TBCKQ8TEA7 893 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 BRD8Q9H0E9 1235 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 DBNDD1Q9H9R9 158 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 FNDC3AQ9Y2H6 1198 aaKnown RBP13.59□□□□□ -0.23
SMC4-202ENST00000357388 TCP11X1B4DZS4 312 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 PHKA1P46020 1223 aa13.59□□□□□ -0.23
SMC4-202ENST00000357388 JAK3P52333 1124 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms