RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
CHRD-203ENST00000356534 PNMA5Q96PV4 448 aa22.52■■□□□ 1.2
CHRD-203ENST00000356534 CSRNP2Q9H175 543 aa22.52■■□□□ 1.2
CHRD-203ENST00000356534 TYW1Q9NV66 732 aaKnown RBP22.52■■□□□ 1.2
CHRD-203ENST00000356534 CLIC4Q9Y696 253 aa22.52■■□□□ 1.2
CHRD-203ENST00000356534 ZMYM2Q9UBW7 1377 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 ARF4P18085 180 aaPredicted RBP22.51■■□□□ 1.19
CHRD-203ENST00000356534 NCLP19338 710 aaKnown RBP22.51■■□□□ 1.19
CHRD-203ENST00000356534 AMHR2Q16671 573 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 AAK1Q2M2I8 961 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 SLC27A1Q6PCB7 646 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 THNSL1Q8IYQ7 743 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 ZNF558Q96NG5 402 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 NSUN3Q9H649 340 aaKnown RBP22.51■■□□□ 1.19
CHRD-203ENST00000356534 CWH43Q9H720 699 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 RSAD1Q9HA92 442 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 PLAGL2Q9UPG8 496 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 SRPRBQ9Y5M8 271 aaKnown RBP22.51■■□□□ 1.19
CHRD-203ENST00000356534 PRUNE2Q8WUY3 3088 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 TCHHQ07283 1943 aa22.51■■□□□ 1.19
CHRD-203ENST00000356534 N4BP3O15049 544 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 SSBP05455 408 aaKnown RBP eCLIP22.5■■□□□ 1.19
CHRD-203ENST00000356534 PRKCBP05771 671 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 TMEM132AQ24JP5 1023 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 NOMO2Q5JPE7 1267 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 C1orf186Q6ZWK4 172 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 KCNK18Q7Z418 384 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 APBB1IPQ7Z5R6 666 aaPredicted RBP22.5■■□□□ 1.19
CHRD-203ENST00000356534 KLHL23Q8NBE8 558 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 ATXN2LQ8WWM7 1075 aaKnown RBP22.5■■□□□ 1.19
CHRD-203ENST00000356534 BSNDQ8WZ55 320 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 CPB2Q96IY4 423 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 ADPGKQ9BRR6 497 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 CCSER1Q9C0I3 900 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 FZD8Q9H461 694 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 KANSL3Q9P2N6 904 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 CCDC39Q9UFE4 941 aa22.5■■□□□ 1.19
CHRD-203ENST00000356534 GRM6O15303 877 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 HIP1RO75146 1068 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 ITGB1P05556 798 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 PLA2G4BP0C869 781 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 ITGA4P13612 1032 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 UBXN11Q5T124 520 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 USP28Q96RU2 1077 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 RUSC1Q9BVN2 902 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 LZTS1Q9Y250 596 aa22.49■■□□□ 1.19
CHRD-203ENST00000356534 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
CHRD-203ENST00000356534 A0A1B0GUA9 196 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 ACKR2O00590 384 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 NCK2O43639 380 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 ZSCAN22P10073 491 aaPredicted RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 MARCKSP29966 332 aaPredicted RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 NASPP49321 788 aaPredicted RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 SLC12A3P55017 1021 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 RNASELQ05823 741 aaKnown RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 PRPF4BQ13523 1007 aaKnown RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 SLC39A14Q15043 492 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 STK38Q15208 465 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 PDE12Q6L8Q7 609 aaKnown RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 FAM173BQ6P4H8 233 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 KCNT2Q6UVM3 1135 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 SPPL3Q8TCT6 385 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 POF1BQ8WVV4 589 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 LPPQ93052 612 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 CCDC113Q9H0I3 377 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 ALG13Q9NP73 1137 aaKnown RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 PUF60Q9UHX1 559 aaKnown RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 FBXO2Q9UK22 296 aaPredicted RBP22.48■■□□□ 1.19
CHRD-203ENST00000356534 ODF2LQ9ULJ1 636 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 INPP5FQ9Y2H2 1132 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 IPPQ9Y573 584 aa22.48■■□□□ 1.19
CHRD-203ENST00000356534 FSD2A1L4K1 749 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 FGF18O76093 207 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 PLCG1P19174 1290 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 ALDH7A1P49419 539 aaKnown RBP22.47■■□□□ 1.19
CHRD-203ENST00000356534 SMTNP53814 917 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 PEX3P56589 373 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 PLCB3Q01970 1234 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 CEBPZQ03701 1054 aaKnown RBP22.47■■□□□ 1.19
CHRD-203ENST00000356534 KRT17Q04695 432 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
CHRD-203ENST00000356534 LARP4BQ92615 738 aaKnown RBP22.47■■□□□ 1.19
CHRD-203ENST00000356534 HLA-CQ95604 372 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 PLIN2Q99541 437 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 LARSQ9P2J5 1176 aaKnown RBP22.47■■□□□ 1.19
CHRD-203ENST00000356534 STK17AQ9UEE5 414 aa22.47■■□□□ 1.19
CHRD-203ENST00000356534 PDCD11Q14690 1871 aaKnown RBP22.46■■□□□ 1.19
CHRD-203ENST00000356534 CCDC169A6NNP5 214 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 H0YCG3 227 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 K7ERI5 159 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 B4GALT5O43286 388 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 OFD1O75665 1012 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 YEATS4O95619 227 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 F13A1P00488 732 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 SCP2P22307 547 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 MRPS5P82675 430 aaKnown RBP22.46■■□□□ 1.19
CHRD-203ENST00000356534 GRIN1Q05586 938 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 KARSQ15046 597 aaKnown RBP22.46■■□□□ 1.19
CHRD-203ENST00000356534 DCAF4L1Q3SXM0 396 aa22.46■■□□□ 1.19
CHRD-203ENST00000356534 ATL3Q6DD88 541 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms