RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 FITM2Q8N6M3 262 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ZSWIM2Q8NEG5 633 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 MRRFQ96E11 262 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 TRIM6Q9C030 488 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 INTS2Q9H0H0 1204 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ATF5Q9Y2D1 282 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 RABGAP1Q9Y3P9 1069 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 MEIS2O14770 477 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 SNHG28P0DPA3 235 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 KYNUQ16719 465 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 C2CD6Q53TS8 623 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 HP1BP3Q5SSJ5 553 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 C6orf118Q5T5N4 469 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 FOXR2Q6PJQ5 311 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 FAM84AQ96KN4 292 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 STK33Q9BYT3 514 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 CDC42EP4Q9H3Q1 356 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 PKD2L1Q9P0L9 805 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 MTRF1LQ9UGC7 380 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 RASAL2Q9UJF2 1139 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 AFF2P51816 1311 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 MYO3BQ8WXR4 1341 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 PSMC2P35998 433 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 NFIAQ12857 509 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 TRIM68Q6AZZ1 485 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGEF19Q8IW93 802 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ETNPPLQ8TBG4 499 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 CENPTQ96BT3 561 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 EIF2AK1Q9BQI3 630 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 METTL14Q9HCE5 456 aaKnown RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 NAV1Q8NEY1 1877 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ZMYM2Q9UBW7 1377 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 PITPNM2Q9BZ72 1349 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 MSH4O15457 936 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 CLDN3O15551 220 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 SPOPO43791 374 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 AGTP01019 485 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 RPA1P27694 616 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 GCLMP48507 274 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 GRAPQ13588 217 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ITIH4Q14624 930 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 CRYMQ14894 314 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 KIAA0825Q8IV33 1275 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ASIC3Q9UHC3 531 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 NARFQ9UHQ1 456 aa10.91□□□□□ -0.66
PTPRA-203ENST00000356147 USP15Q9Y4E8 981 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-203ENST00000356147 ABCA3Q99758 1704 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 ENO4A6NNW6 628 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 hCG_1984214I3L0E3 225 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 EXOC3O60645 756 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 SHMT1P34896 483 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 GCKP35557 465 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 MYL7Q01449 175 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 ADCY2Q08462 1091 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 BZW1Q7L1Q6 419 aaKnown RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 ZNF713Q8N859 430 aaPredicted RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 SPIRE2Q8WWL2 714 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 LENG9Q96B70 501 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 TMEM237Q96Q45 408 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 APEX2Q9UBZ4 518 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 ANKRD62A6NC57 917 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 FAM187AA6NFU0 413 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 RTN2O75298 545 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 PDE6CP51160 858 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 NPEPPSP55786 919 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 CAPN12Q6ZSI9 719 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 SRRM1Q8IYB3 904 aaKnown RBP10.9□□□□□ -0.66
PTPRA-203ENST00000356147 SYCP3Q8IZU3 236 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 DYDC2Q96IM9 177 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 PCDHB18PQ96TA0 734 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 AGPAT1Q99943 283 aa10.9□□□□□ -0.66
PTPRA-203ENST00000356147 NCANO14594 1321 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 DDX39AO00148 427 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SGPL1O95470 568 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 CETPP11597 493 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 BRAFP15056 766 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 GABPAQ06546 454 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SEL1L2Q5TEA6 688 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 MAGEC3Q8TD91 643 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 P3H4Q92791 437 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms