RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PPME1Q9Y570 386 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 DUSP10Q9Y6W6 482 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 SIP14410 1827 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 CETN1Q12798 172 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 LRRN4CLQ8ND94 238 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 NAPGQ99747 312 aaPredicted RBP27.94■■■□□ 2.06
CLK2-201ENST00000355560 VTA1Q9NP79 307 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 APEX2Q9UBZ4 518 aa27.94■■■□□ 2.06
CLK2-201ENST00000355560 ITGBL1O95965 494 aaPredicted RBP27.93■■■□□ 2.06
CLK2-201ENST00000355560 GARTP22102 1010 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 LIG4P49917 911 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 DRP2Q13474 957 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 NAA30Q147X3 362 aaPredicted RBP27.93■■■□□ 2.06
CLK2-201ENST00000355560 TAPT1Q6NXT6 567 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 KCNN1Q92952 543 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 FBXL18Q96ME1 805 aa27.93■■■□□ 2.06
CLK2-201ENST00000355560 MACROD2A1Z1Q3 448 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 P4HA2O15460 535 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 SCP2P22307 547 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 MAGEA1P43355 309 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 NCBP1Q09161 790 aaKnown RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 GRB14Q14449 540 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 PLCB4Q15147 1175 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 ZNF467Q7Z7K2 595 aaPredicted RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 DPP9Q86TI2 863 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 LMO3Q8TAP4 145 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.92■■■□□ 2.06
CLK2-201ENST00000355560 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 DNAJC12Q9UKB3 198 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 TRPM7Q96QT4 1865 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 TULP1O00294 542 aaPredicted RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 MXI1P50539 228 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 PTK2Q05397 1052 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 CAPSQ13938 189 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 SLC18A3Q16572 532 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 GJC2Q5T442 439 aaPredicted RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 GPD1LQ8N335 351 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 CCDC127Q96BQ5 260 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 SMARCAD1Q9H4L7 1026 aa27.92■■■□□ 2.06
CLK2-201ENST00000355560 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.92■■■□□ 2.06
CLK2-201ENST00000355560 BZW2Q9Y6E2 419 aaKnown RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 V9GYY5 206 aaPredicted RBP27.92■■■□□ 2.06
CLK2-201ENST00000355560 ZBTB42B2RXF5 422 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 K7ERI5 159 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 SLC26A2P50443 739 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 ARHGAP1Q07960 439 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 ADAMTS1Q9UHI8 967 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 TRPC6Q9Y210 931 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 USP20Q9Y2K6 914 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 F8VZ95 297 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 PNMA6AP0CW24 399 aaPredicted RBP27.91■■■□□ 2.06
CLK2-201ENST00000355560 MNS1Q8NEH6 495 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 PARD3BQ8TEW8 1205 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 SECISBP2LQ93073 1101 aaKnown RBP27.91■■■□□ 2.06
CLK2-201ENST00000355560 CARD6Q9BX69 1037 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 STK33Q9BYT3 514 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 TMEM117Q9H0C3 514 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 SUGCTQ9HAC7 445 aa27.91■■■□□ 2.06
CLK2-201ENST00000355560 A0A087X0T9 212 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 FAM228BP0C875 321 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 PRKCIP41743 596 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 STAT1P42224 750 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 MCCD1P59942 119 aaPredicted RBP27.9■■■□□ 2.06
CLK2-201ENST00000355560 EPC2Q52LR7 807 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 PLEKHH3Q7Z736 793 aa27.9■■■□□ 2.06
CLK2-201ENST00000355560 MAPK4P31152 587 aa27.89■■■□□ 2.06
CLK2-201ENST00000355560 LAMC2Q13753 1193 aa27.89■■■□□ 2.06
CLK2-201ENST00000355560 ZNF571Q7Z3V5 609 aaPredicted RBP27.89■■■□□ 2.06
CLK2-201ENST00000355560 PRPF31Q8WWY3 499 aaKnown RBP27.89■■■□□ 2.06
CLK2-201ENST00000355560 FAM213AQ9BRX8 229 aa27.89■■■□□ 2.06
CLK2-201ENST00000355560 DAAM1Q9Y4D1 1078 aa27.89■■■□□ 2.06
CLK2-201ENST00000355560 RFX1P22670 979 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 ADCYAP1R1P41586 468 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 CYP24A1Q07973 514 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 DRAP1Q14919 205 aaPredicted RBP27.89■■■□□ 2.05
CLK2-201ENST00000355560 PHLDB3Q6NSJ2 640 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 CHADLQ6NUI6 762 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 MAMDC4Q6UXC1 1216 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 TXLNBQ8N3L3 684 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 MAML3Q96JK9 1138 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 MFSD14AQ96MC6 490 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 KATNBL1Q9H079 304 aa27.89■■■□□ 2.05
CLK2-201ENST00000355560 LUC7LQ9NQ29 371 aaKnown RBP27.89■■■□□ 2.05
CLK2-201ENST00000355560 LRRIQ3A6PVS8 624 aaPredicted RBP27.88■■■□□ 2.05
CLK2-201ENST00000355560 GAS2O43903 313 aaKnown RBP27.88■■■□□ 2.05
CLK2-201ENST00000355560 GFPT2O94808 682 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 SNAI1O95863 264 aaPredicted RBP27.88■■■□□ 2.05
CLK2-201ENST00000355560 GH1P01241 217 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 FERP16591 822 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 SOX5P35711 763 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 ZNF157P51786 506 aaPredicted RBP27.88■■■□□ 2.05
CLK2-201ENST00000355560 IER5Q5VY09 327 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 USP37Q86T82 979 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 RASAL3Q86YV0 1011 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 ZNF710Q8N1W2 664 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 LRRC71Q8N4P6 559 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 RBM47A0AV96 593 aaKnown RBP27.88■■■□□ 2.05
CLK2-201ENST00000355560 PMM2O15305 246 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 PJA2O43164 708 aa27.88■■■□□ 2.05
CLK2-201ENST00000355560 ADCY3O60266 1144 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms