RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ATP9AO75110 1047 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 GCLMP48507 274 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 OTUD6AQ7L8S5 288 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 ZIM3Q96PE6 472 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 NAP1L3Q99457 506 aaPredicted RBP24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 C17orf75Q9HAS0 396 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 SEPT11Q9NVA2 429 aaKnown RBP24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 HACL1Q9UJ83 578 aa24.09■■□□□ 1.45
NKX2-1-201ENST00000354822 SLC16A4O15374 487 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 SHOX2O60902 331 aaPredicted RBP24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 FAM153BP0C7A2 387 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 ABCB4P21439 1286 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 CCND2P30279 289 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 UGCGQ16739 394 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 FAM153CQ494X1 144 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 TBC1D10BQ4KMP7 808 aaPredicted RBP24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 FAM102BQ5T8I3 360 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 NLRX1Q86UT6 975 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 CD302Q8IX05 232 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 GPRASP2Q96D09 838 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 MOV10L1Q9BXT6 1211 aaKnown RBP24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 AS3MTQ9HBK9 375 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 FAM153AQ9UHL3 310 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 PCDHA10Q9Y5I2 948 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 PFASO15067 1338 aa24.08■■□□□ 1.45
NKX2-1-201ENST00000354822 TESPA1A2RU30 521 aaPredicted RBP24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 TISP43B9A030 160 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 BHMG1C9JSJ3 638 aaPredicted RBP24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 LRRN2O75325 713 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 MXI1P50539 228 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 C1orf220Q5T0J3 134 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 DCAF15Q66K64 600 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 NSMFQ6X4W1 530 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 CARD9Q9H257 536 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 TBX20Q9UMR3 447 aa24.08■■□□□ 1.44
NKX2-1-201ENST00000354822 CCNE2O96020 404 aa24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 DMP1Q13316 513 aaPredicted RBP24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 VSIG10LQ86VR7 867 aa24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 KIFAP3Q92845 792 aa24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 AP1M1Q9BXS5 423 aa24.07■■□□□ 1.44
NKX2-1-201ENST00000354822 OAZ1P54368 228 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 BACE1P56817 501 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 DGKZQ13574 1117 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 LRRC31Q6UY01 552 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 C1orf131Q8NDD1 294 aaKnown RBP24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 NTPCRQ9BSD7 190 aaKnown RBP24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 THAP2Q9H0W7 228 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 HSPA9P38646 679 aaKnown RBP24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 ERVK-9P63128 1117 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 USP37Q86T82 979 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 MAP4K3Q8IVH8 894 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 ARHGEF19Q8IW93 802 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 TMEM161BQ8NDZ6 487 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 SPIRE2Q8WWL2 714 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 TMEM117Q9H0C3 514 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 GPRC5CQ9NQ84 441 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 RNF146Q9NTX7 359 aa24.06■■□□□ 1.44
NKX2-1-201ENST00000354822 GUCY2FP51841 1108 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 BAATQ14032 418 aaPredicted RBP24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 PTPROQ16827 1216 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 LRRC45Q96CN5 670 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 CCDC169A6NNP5 214 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 DDX3YO15523 660 aaKnown RBP24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 RTN2O75298 545 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 NR3C2P08235 984 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 GZMAP12544 262 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 HLTFQ14527 1009 aaKnown RBP eCLIP24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 R3HDM1Q15032 1099 aaKnown RBP24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 SNRNP35Q16560 246 aaKnown RBP24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 ARHGEF26Q96DR7 871 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 SH2D3AQ9BRG2 576 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 PLEKHA4Q9H4M7 779 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 TAS2R14Q9NYV8 317 aa24.05■■□□□ 1.44
NKX2-1-201ENST00000354822 DOCK1Q14185 1865 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 FTLP02792 175 aaPredicted RBP24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 CNGA1P29973 690 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 NPTX2P47972 431 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 MFAP3P55082 362 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 GPC5P78333 572 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 ENPEPQ07075 957 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 KRT39Q6A163 491 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 ANO5Q75V66 913 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 FAM71AQ8IYT1 594 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 SCYL3Q8IZE3 742 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 PLEKHO2Q8TD55 490 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 ATP6V0A1Q93050 837 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 ATG4CQ96DT6 458 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 MAF1Q9H063 256 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 DDX47Q9H0S4 455 aaKnown RBP24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 IGSF9BQ9UPX0 1349 aa24.04■■□□□ 1.44
NKX2-1-201ENST00000354822 TMEM150BA6NC51 233 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 MIF4GDA9UHW6 222 aaKnown RBP24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 NBPF12Q5TAG4 269 aaPredicted RBP24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 PLA2G4FQ68DD2 849 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 C11orf63Q6NUN7 778 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 ZNF280CQ8ND82 737 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 TMC2Q8TDI7 906 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 KMT5AQ9NQR1 393 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms