RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDX4-201ENST00000353507 PKD2L1Q9P0L9 805 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 DDX20Q9UHI6 824 aaKnown RBP13.09□□□□□ -0.31
DDX4-201ENST00000353507 EP400Q96L91 3159 aa13.09□□□□□ -0.31
DDX4-201ENST00000353507 CHRNA3P32297 505 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 GPC5P78333 572 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 DLG4P78352 724 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 DRP2Q13474 957 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 CPLX4Q7Z7G2 160 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ARHGEF19Q8IW93 802 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ZDHHC18Q9NUE0 388 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 MTRF1LQ9UGC7 380 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 BACH1O14867 736 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 CAND2O75155 1236 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 MMP10P09238 476 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 GCLMP48507 274 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ALCAMQ13740 583 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 MESDQ14696 234 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 ZNF746Q6NUN9 644 aaPredicted RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 AADACL2Q6P093 401 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 MIER3Q7Z3K6 550 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 LMO3Q8TAP4 145 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 FBXO25Q8TCJ0 367 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ACCSQ96QU6 501 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 SELENOSQ9BQE4 189 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 TXLNGYQ9BZA5 131 aa13.08□□□□□ -0.32
DDX4-201ENST00000353507 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
DDX4-201ENST00000353507 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 NUDT17P0C025 328 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 GBP1P32455 592 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 ACTN3Q08043 901 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 TNIP1Q15025 636 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 PLCB4Q15147 1175 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 QPCTQ16769 361 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 C6orf89Q6UWU4 347 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 DAW1Q8N136 415 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 KRT35Q92764 455 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 TLCD1Q96CP7 247 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 ACTR5Q9H9F9 607 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 ZNF646O15015 1829 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 TLDC2A0PJX2 215 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 SMIM23A6NLE4 172 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 TCP10L2B9ZVM9 353 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 P4HA2O15460 535 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 MXI1P50539 228 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 STRA6Q9BX79 667 aa13.07□□□□□ -0.32
DDX4-201ENST00000353507 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
DDX4-201ENST00000353507 COL2A1P02458 1487 aaPredicted RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 TISP43B9A030 160 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 RTN2O75298 545 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 SHBGP04278 402 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 DRG2P55039 364 aaKnown RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 AOC3Q16853 763 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 RIT2Q99578 217 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 MTUS1Q9ULD2 1270 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 C5orf60A6NFR6 353 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 PODXLO00592 558 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 RGS16O15492 202 aaPredicted RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 SPOPO43791 374 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 CTNND1O60716 968 aaKnown RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 GGPS1O95749 300 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 COMTP21964 271 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 EPC2Q52LR7 807 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 CCDC137Q6PK04 289 aaKnown RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 ZDHHC24Q6UX98 284 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 PRELID2Q8N945 189 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 TATDN2Q93075 761 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 XPO6Q96QU8 1125 aaKnown RBP13.06□□□□□ -0.32
DDX4-201ENST00000353507 RPS6KC1Q96S38 1066 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
DDX4-201ENST00000353507 MXRA8Q9BRK3 442 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms