RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RBM26Q5T8P6 1007 aaKnown RBP26.47■■□□□ 1.83
CPNE1-202ENST00000352393 GKAP1Q5VSY0 366 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-202ENST00000352393 DENND2CQ68D51 928 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 B3GNT9Q6UX72 402 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 MDM1Q8TC05 714 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 WDR11Q9BZH6 1224 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 CTTNBP2NLQ9P2B4 639 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 PCYOX1Q9UHG3 505 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 RPTORQ8N122 1335 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 HIP1RO75146 1068 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 KRT13P13646 458 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 STAT2P52630 851 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 LACTB2Q53H82 288 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-202ENST00000352393 STRIP1Q5VSL9 837 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 ARHGEF19Q8IW93 802 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 UBL4BQ8N7F7 174 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 VTI1AQ96AJ9 217 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 GOPCQ9HD26 462 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 SLC40A1Q9NP59 571 aa26.47■■□□□ 1.83
CPNE1-202ENST00000352393 COL2A1P02458 1487 aaPredicted RBP26.46■■□□□ 1.83
CPNE1-202ENST00000352393 EMSYQ7Z589 1322 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 PHF20L1A8MW92 1017 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 DNM1LO00429 736 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 POLR2MP0CAP2 368 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 ALDH1B1P30837 517 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 DLG4P78352 724 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 CEP55Q53EZ4 464 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 SYCP3Q8IZU3 236 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 CHMP6Q96FZ7 201 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 A1CFQ9NQ94 594 aaKnown RBP26.46■■□□□ 1.83
CPNE1-202ENST00000352393 PCDHA3Q9Y5H8 950 aa26.46■■□□□ 1.83
CPNE1-202ENST00000352393 GOLGA6L7A0A1B0GV03 622 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 FTLP02792 175 aaPredicted RBP26.45■■□□□ 1.83
CPNE1-202ENST00000352393 ALAS1P13196 640 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 GBP1P32455 592 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 MMP13P45452 471 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 SETQ01105 290 aaPredicted RBP26.45■■□□□ 1.83
CPNE1-202ENST00000352393 P3H4Q92791 437 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 RPS6KC1Q96S38 1066 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 LXNQ9BS40 222 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 UBE2TQ9NPD8 197 aaPredicted RBP26.45■■□□□ 1.83
CPNE1-202ENST00000352393 KLC4Q9NSK0 619 aa26.45■■□□□ 1.83
CPNE1-202ENST00000352393 CCDC169A6NNP5 214 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 GGPS1O95749 300 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 UBXN2AP68543 259 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 EPC2Q52LR7 807 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 TTC27Q6P3X3 843 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 INTS8Q75QN2 995 aaKnown RBP26.45■■□□□ 1.82
CPNE1-202ENST00000352393 ZDHHC14Q8IZN3 488 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 RDH13Q8NBN7 331 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 ZNF577Q9BSK1 485 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 ADAM7Q9H2U9 754 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 SERPINA10Q9UK55 444 aa26.45■■□□□ 1.82
CPNE1-202ENST00000352393 TRPC5Q9UL62 973 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-202ENST00000352393 ARHGEF35A5YM69 484 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 P4HA2O15460 535 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 MTA2O94776 668 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 VIL1P09327 827 aaKnown RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 RPL21P46778 160 aaKnown RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 PEX5P50542 639 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 GPC5P78333 572 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 CPLX4Q7Z7G2 160 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 TMEM174Q8WUU8 243 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 ATXN2LQ8WWM7 1075 aaKnown RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 CCDC114Q96M63 670 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 ZNF317Q96PQ6 595 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 K7ENM7 598 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 ARP10275 920 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 PPP3CAQ08209 521 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 RPUSD2Q8IZ73 545 aaKnown RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 PLCD3Q8N3E9 789 aa26.44■■□□□ 1.82
CPNE1-202ENST00000352393 CNOT7Q9UIV1 285 aaKnown RBP26.44■■□□□ 1.82
CPNE1-202ENST00000352393 PODXLO00592 558 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 CTNND1O60716 968 aaKnown RBP26.43■■□□□ 1.82
CPNE1-202ENST00000352393 ENTPD3O75355 529 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 CHN1P15882 459 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 CCT6BQ92526 530 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 TEKT3Q9BXF9 490 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 PARP2Q9UGN5 583 aa26.43■■□□□ 1.82
CPNE1-202ENST00000352393 ECE1P42892 770 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 VAMP7P51809 220 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 C1orf220Q5T0J3 134 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 C12orf56Q8IXR9 622 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 CD101Q93033 1021 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 TMEM109Q9BVC6 243 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 EHMT1Q9H9B1 1298 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 TMEM110-MUSTN1A8MSY1 372 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 RTN2O75298 545 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 COMTP21964 271 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 SLC29A2Q14542 456 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 CYP1B1Q16678 543 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 MORC4Q8TE76 937 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 RANBP17Q9H2T7 1088 aaKnown RBP26.42■■□□□ 1.82
CPNE1-202ENST00000352393 AZI2Q9H6S1 392 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 BCS1LQ9Y276 419 aa26.42■■□□□ 1.82
CPNE1-202ENST00000352393 MMEP08473 750 aa26.41■■□□□ 1.82
CPNE1-202ENST00000352393 SCTRP47872 440 aa26.41■■□□□ 1.82
CPNE1-202ENST00000352393 CETN1Q12798 172 aa26.41■■□□□ 1.82
CPNE1-202ENST00000352393 UBAP2Q5T6F2 1119 aaKnown RBP26.41■■□□□ 1.82
CPNE1-202ENST00000352393 SEL1L2Q5TEA6 688 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms