RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 AMACRQ9UHK6 382 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 WDR64B1ANS9 1081 aa23.93■■□□□ 1.42
UPF3A-201ENST00000351487 FGGP02679 453 aa23.93■■□□□ 1.42
UPF3A-201ENST00000351487 KRT76Q01546 638 aa23.93■■□□□ 1.42
UPF3A-201ENST00000351487 PDCD2LQ9BRP1 358 aa23.93■■□□□ 1.42
UPF3A-201ENST00000351487 MXI1P50539 228 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 GNGT1P63211 74 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 CLUL1Q15846 466 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 PPP2R5EQ16537 467 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 C11orf63Q6NUN7 778 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 KDM7AQ6ZMT4 941 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 HVCN1Q96D96 273 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 NAP1L3Q99457 506 aaPredicted RBP23.92■■□□□ 1.42
UPF3A-201ENST00000351487 PDGFDQ9GZP0 370 aaPredicted RBP23.92■■□□□ 1.42
UPF3A-201ENST00000351487 TMEM117Q9H0C3 514 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 PXMP2Q9NR77 195 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 LCMT1Q9UIC8 334 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 ARID2Q68CP9 1835 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 MYO1CO00159 1063 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 SLC16A4O15374 487 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 VCAM1P19320 739 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 PEX3P56589 373 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 TNFAIP1Q13829 316 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 RNPC3Q96LT9 517 aaKnown RBP23.92■■□□□ 1.42
UPF3A-201ENST00000351487 NEUROG2Q9H2A3 272 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 GPRC5CQ9NQ84 441 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 RSPH14Q9UHP6 348 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 PLAAQ9Y263 795 aa23.92■■□□□ 1.42
UPF3A-201ENST00000351487 TMEM150BA6NC51 233 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 CTNND1O60716 968 aaKnown RBP23.91■■□□□ 1.42
UPF3A-201ENST00000351487 CCNE2O96020 404 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 ADRB2P07550 413 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 PTENP60484 403 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 CIAPIN1Q6FI81 312 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 DDX42Q86XP3 938 aaKnown RBP eCLIP23.91■■□□□ 1.42
UPF3A-201ENST00000351487 SH2D3CQ8N5H7 860 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 ZSWIM2Q8NEG5 633 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 RDM1Q8NG50 284 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 RMDN3Q96TC7 470 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 TSPYL1Q9H0U9 437 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 EXOC7Q9UPT5 735 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 DOCK1Q14185 1865 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 TTI1O43156 1089 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 ATP9AO75110 1047 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 HSD17B3P37058 310 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 DGKZQ13574 1117 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 ATP6V1G3Q96LB4 118 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 TRERF1Q96PN7 1200 aa23.91■■□□□ 1.42
UPF3A-201ENST00000351487 HMGB1P1B2RPK0 211 aaPredicted RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 FDX1P10109 184 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 IRX5P78411 483 aaPredicted RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 KCTD16Q68DU8 428 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 RNF207Q6ZRF8 634 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 MAP4K3Q8IVH8 894 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 FAM71AQ8IYT1 594 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 SH2D3AQ9BRG2 576 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 FAM114A2Q9NRY5 505 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 MIF4GDA9UHW6 222 aaKnown RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 H0YGN5 161 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 FTLP02792 175 aaPredicted RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 UAP1Q16222 522 aaPredicted RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 XKR9Q5GH70 373 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 XRRA1Q6P2D8 792 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 RPUSD2Q8IZ73 545 aaKnown RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 TMEM161BQ8NDZ6 487 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 EPS8L1Q8TE68 723 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 NOCTQ9UK39 431 aaKnown RBP23.9■■□□□ 1.42
UPF3A-201ENST00000351487 BCS1LQ9Y276 419 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 NFS1Q9Y697 457 aa23.9■■□□□ 1.42
UPF3A-201ENST00000351487 DAPK3O43293 454 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 RTN2O75298 545 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 MTA2O94776 668 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 MYCLP12524 364 aaPredicted RBP23.89■■□□□ 1.41
UPF3A-201ENST00000351487 ADSSP30520 456 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 ZNF280AP59817 542 aaPredicted RBP23.89■■□□□ 1.41
UPF3A-201ENST00000351487 TBX20Q9UMR3 447 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 SCAF8Q9UPN6 1271 aaKnown RBP23.89■■□□□ 1.41
UPF3A-201ENST00000351487 UTP11Q9Y3A2 253 aaKnown RBP23.89■■□□□ 1.41
UPF3A-201ENST00000351487 KIAA1217Q5T5P2 1943 aa23.89■■□□□ 1.41
UPF3A-201ENST00000351487 ZNFX1Q9P2E3 1918 aaKnown RBP23.89■■□□□ 1.41
UPF3A-201ENST00000351487 ZBED4O75132 1171 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 GZMAP12544 262 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 GPC5P78333 572 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 MTMR2Q13614 643 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 MTMR3Q13615 1198 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 SNRNP35Q16560 246 aaKnown RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 DNAJC21Q5F1R6 531 aaKnown RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 PLA2G4FQ68DD2 849 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 ALG3Q92685 438 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 SENP7Q9BQF6 1050 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 TMBIM4Q9HC24 238 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 TCEAL9Q9UHQ7 104 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 COQ4Q9Y3A0 265 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 ALG6Q9Y672 507 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 SYNGAP1Q96PV0 1343 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 COL11A1P12107 1806 aaPredicted RBP23.88■■□□□ 1.41
UPF3A-201ENST00000351487 GOLGA6L10A0A0M3HER8 536 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 SMTNP53814 917 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 CEP85LQ5SZL2 805 aa23.88■■□□□ 1.41
UPF3A-201ENST00000351487 FAM102BQ5T8I3 360 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms