RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SLC39A5Q6ZMH5 540 aa29.7■■■□□ 2.34
SSBP4-202ENST00000348495 GOLGA5Q8TBA6 731 aa29.7■■■□□ 2.34
SSBP4-202ENST00000348495 AGPAT3Q9NRZ7 376 aa29.7■■■□□ 2.34
SSBP4-202ENST00000348495 GOLGA6L3A6NEY3 463 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 INO80B-WBP1J3KQ70 363 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 CALUO43852 315 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-202ENST00000348495 SNRPFP62306 86 aaKnown RBP29.69■■■□□ 2.34
SSBP4-202ENST00000348495 FAM187BQ17R55 369 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 SLC39A4Q6P5W5 647 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 TMEM174Q8WUU8 243 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 SCLT1Q96NL6 688 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 GCOM2Q9BZD3 368 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-202ENST00000348495 INO80BQ9C086 356 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-202ENST00000348495 FANCLQ9NW38 375 aa29.69■■■□□ 2.34
SSBP4-202ENST00000348495 CGNQ9P2M7 1197 aaKnown RBP29.69■■■□□ 2.34
SSBP4-202ENST00000348495 ACKR2O00590 384 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 CD4P01730 458 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 PRKCBP05771 671 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 DARSP14868 501 aaKnown RBP29.68■■■□□ 2.34
SSBP4-202ENST00000348495 CRYBB1P53674 252 aaPredicted RBP29.68■■■□□ 2.34
SSBP4-202ENST00000348495 AMHR2Q16671 573 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 LRRC55Q6ZSA7 311 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 HS2ST1Q7LGA3 356 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 CSGALNACT2Q8N6G5 542 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 OSMRQ99650 979 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 CELF4Q9BZC1 486 aaKnown RBP29.68■■■□□ 2.34
SSBP4-202ENST00000348495 TISP43B9A030 160 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 CAND2O75155 1236 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 MGAT3Q09327 533 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 ANKRD33Q7Z3H0 272 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 SAMSN1Q9NSI8 373 aaKnown RBP29.68■■■□□ 2.34
SSBP4-202ENST00000348495 PRMT7Q9NVM4 692 aaPredicted RBP29.68■■■□□ 2.34
SSBP4-202ENST00000348495 GINS2Q9Y248 185 aa29.68■■■□□ 2.34
SSBP4-202ENST00000348495 TTLL13PA6NNM8 815 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 ANKRD63C9JTQ0 380 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 GOLGA6L19H0YKK7 550 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 HNRNPDLO14979 420 aaKnown RBP29.67■■■□□ 2.34
SSBP4-202ENST00000348495 CSDE1O75534 798 aaKnown RBP29.67■■■□□ 2.34
SSBP4-202ENST00000348495 ZNF18P17022 549 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 EIF4BP23588 611 aaKnown RBP29.67■■■□□ 2.34
SSBP4-202ENST00000348495 FKBP3Q00688 224 aaKnown RBP29.67■■■□□ 2.34
SSBP4-202ENST00000348495 CDKAL1Q5VV42 579 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 ZPBP2Q6X784 338 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 C12orf56Q8IXR9 622 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 TMEM40Q8WWA1 233 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 MRPL4Q9BYD3 311 aaKnown RBP29.67■■■□□ 2.34
SSBP4-202ENST00000348495 USP20Q9Y2K6 914 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 TRPV2Q9Y5S1 764 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 CDY2AQ9Y6F7 541 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 MROH7Q68CQ1 1323 aa29.67■■■□□ 2.34
SSBP4-202ENST00000348495 CHRNA1P02708 482 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 NR3C1P04150 777 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 ADSSP30520 456 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 THPOP40225 353 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 ATN1P54259 1190 aaPredicted RBP29.66■■■□□ 2.34
SSBP4-202ENST00000348495 IRF2BP1Q8IU81 584 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 PAWRQ96IZ0 340 aaKnown RBP29.66■■■□□ 2.34
SSBP4-202ENST00000348495 PRIMPOLQ96LW4 560 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 TARS2Q9BW92 718 aaKnown RBP29.66■■■□□ 2.34
SSBP4-202ENST00000348495 SRRTQ9BXP5 876 aaKnown RBP29.66■■■□□ 2.34
SSBP4-202ENST00000348495 C11orf49Q9H6J7 331 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 STYXL1Q9Y6J8 313 aa29.66■■■□□ 2.34
SSBP4-202ENST00000348495 RBL2Q08999 1139 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 FAM26DQ5JW98 314 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 SLC9A9Q8IVB4 645 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 NOC3LQ8WTT2 800 aaKnown RBP29.65■■■□□ 2.34
SSBP4-202ENST00000348495 DMAC2Q9NW81 257 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 CLIC2O15247 247 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 MYBPC2Q14324 1141 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 PCBP1Q15365 356 aaKnown RBP eCLIP29.65■■■□□ 2.341e-8■■■■□ 20.1
SSBP4-202ENST00000348495 TPD52L1Q16890 204 aaPredicted RBP29.65■■■□□ 2.34
SSBP4-202ENST00000348495 UVSSAQ2YD98 709 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 BICD1Q96G01 975 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 EEF2KMTQ96G04 330 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 TOX2Q96NM4 488 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 ACO2Q99798 780 aaKnown RBP29.65■■■□□ 2.34
SSBP4-202ENST00000348495 THAP9Q9H5L6 903 aa29.65■■■□□ 2.34
SSBP4-202ENST00000348495 CNTNAP2Q9UHC6 1331 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 M0QZ92 97 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 NR2F2P24468 414 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 LIG4P49917 911 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 CEP63Q96MT8 703 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 GRPEL1Q9HAV7 217 aa29.64■■■□□ 2.34
SSBP4-202ENST00000348495 B4GALT5O43286 388 aa29.63■■■□□ 2.33
SSBP4-202ENST00000348495 CTSHP09668 335 aa29.63■■■□□ 2.33
SSBP4-202ENST00000348495 RPL13P26373 211 aaKnown RBP29.63■■■□□ 2.33
SSBP4-202ENST00000348495 ADAM9Q13443 819 aa29.63■■■□□ 2.33
SSBP4-202ENST00000348495 PRPF4BQ13523 1007 aaKnown RBP29.63■■■□□ 2.33
SSBP4-202ENST00000348495 TSHZ1Q6ZSZ6 1077 aa29.63■■■□□ 2.33
SSBP4-202ENST00000348495 CBWD1Q9BRT8 395 aa29.63■■■□□ 2.33
SSBP4-202ENST00000348495 TSPAN1O60635 241 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 PQBP1O60828 265 aaKnown RBP29.62■■■□□ 2.33
SSBP4-202ENST00000348495 CKBP12277 381 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 TRAF7Q6Q0C0 670 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 UBE2Q1Q7Z7E8 422 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 FGFR1OPO95684 399 aaKnown RBP29.62■■■□□ 2.33
SSBP4-202ENST00000348495 GARTP22102 1010 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 PROZP22891 400 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 TPM4P67936 248 aa29.62■■■□□ 2.33
SSBP4-202ENST00000348495 TRIM60Q495X7 471 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms