RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 OFD1O75665 1012 aa23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 MCCD1P59942 119 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 HSP90AA2PQ14568 343 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 DNTTIP2Q5QJE6 756 aaKnown RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 CDCA2Q69YH5 1023 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 RAD9BQ6WBX8 426 aa23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 TLK2Q86UE8 772 aa23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 PPP1R13BQ96KQ4 1090 aa23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 NUCKS1Q9H1E3 243 aaKnown RBP23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 STYXL1Q9Y6J8 313 aa23.41■■□□□ 1.34
TSPAN3-202ENST00000346495 NOL4O94818 638 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 KLRC1P26715 233 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 HNRNPH3P31942 346 aaKnown RBP23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 IGBP1P78318 339 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 CDK17Q00537 523 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 SNRNP35Q16560 246 aaKnown RBP23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 SLFN12LQ6IEE8 588 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 METTL13Q8N6R0 699 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 BAP1Q92560 729 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 FBXL18Q96ME1 805 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 GANQ9H2C0 597 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 KIAA1586Q9HCI6 787 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 PPP2R2CQ9Y2T4 447 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 ZSWIM8A7E2V4 1837 aa23.4■■□□□ 1.34
TSPAN3-202ENST00000346495 GOLGA8IPA6NC78 632 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 GOLGA8JA6NMD2 632 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 N4BP1O75113 896 aaKnown RBP23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 TRIM49P0CI25 452 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 TRIM49CP0CI26 452 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 PON1P27169 355 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 MTF1Q14872 753 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 PDXDC1Q6P996 788 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 WDR59Q6PJI9 974 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 TOGARAM2Q6ZUX3 1019 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 RRAGAQ7L523 313 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 RHPN2Q8IUC4 686 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 GPD1LQ8N335 351 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 RNF149Q8NC42 400 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 SAAL1Q96ER3 474 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 AP5M1Q9H0R1 490 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 GCNT4Q9P109 453 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 PLAGL2Q9UPG8 496 aa23.39■■□□□ 1.33
TSPAN3-202ENST00000346495 EVPLQ92817 2033 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 SRGAP2CP0DJJ0 459 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 SLC9A1P19634 815 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 APLP1P51693 650 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 CLCN3P51790 818 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 POLR2FP61218 127 aaKnown RBP23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 ENPEPQ07075 957 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 ZSWIM2Q8NEG5 633 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 CHP1Q99653 195 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 ARHGAP39Q9C0H5 1083 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 CCDC113Q9H0I3 377 aa23.38■■□□□ 1.33
TSPAN3-202ENST00000346495 GOLGA6L9A6NEM1 432 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 LRRC53A6NM62 1247 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 P4HA2O15460 535 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 ADRB2P07550 413 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CCDC175P0C221 793 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 TMOD1P28289 359 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CPT1AP50416 773 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 MYL7Q01449 175 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 PPFIA1Q13136 1202 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 MFSD14CQ5VZR4 134 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 ZPBP2Q6X784 338 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 USP37Q86T82 979 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CBWD2Q8IUF1 395 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 LINC01465Q8N7H1 131 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 C16orf45Q96MC5 204 aaPredicted RBP23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 EXTL3O43909 919 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 AKR1A1P14550 325 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 POU5F1BQ06416 359 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 KIF22Q14807 665 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 PTPN14Q15678 1187 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 GRIK4Q16099 956 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CBWD6Q4V339 395 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CBWD3Q5JTY5 395 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 CBWD5Q5RIA9 395 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 KLHDC7AQ5VTJ3 777 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 DPY19L2P1Q6NXN4 242 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 MTHFD1LQ6UB35 978 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 TMC2Q8TDI7 906 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 SYN2Q92777 582 aaPredicted RBP23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 MFSD14AQ96MC6 490 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 TARS2Q9BW92 718 aaKnown RBP23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 MRPL4Q9BYD3 311 aaKnown RBP23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 NLRC4Q9NPP4 1024 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 FBXL5Q9UKA1 691 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 GABRQQ9UN88 632 aa23.37■■□□□ 1.33
TSPAN3-202ENST00000346495 KAT6AQ92794 2004 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 RRN3P2A6NIE6 340 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 F2P00734 622 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 DLG4P78352 724 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 CETN1Q12798 172 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 MAPK6Q16659 721 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 NYAP1Q6ZVC0 841 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 REXO1L1PQ8IX06 675 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 NLRP4Q96MN2 994 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 NFKBIZQ9BYH8 718 aa23.36■■□□□ 1.33
TSPAN3-202ENST00000346495 AGO2Q9UKV8 859 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms