RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LENG9Q96B70 501 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 ROBO3Q96MS0 1386 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 RAD51CO43502 376 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 GLI1P08151 1106 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 MMEP08473 750 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 CLCN3P51790 818 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 USP37Q86T82 979 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 ZNF302Q9NR11 478 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 GRAP2O75791 330 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 CYP3A4P08684 503 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 MAPK4P31152 587 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 SOX5P35711 763 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 NSFP46459 744 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 DMTNQ08495 405 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 MKL1Q969V6 931 aa14.35□□□□□ -0.11
CASC4-202ENST00000345795 TRIM6Q9C030 488 aaPredicted RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 NUCKS1Q9H1E3 243 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 CNOT8Q9UFF9 292 aaKnown RBP14.35□□□□□ -0.11
CASC4-202ENST00000345795 NFKBIEO00221 500 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PGRMC1O00264 195 aaKnown RBP14.34□□□□□ -0.11
CASC4-202ENST00000345795 FAM153BP0C7A2 387 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PPATQ06203 517 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PAK2Q13177 524 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 FAM153CQ494X1 144 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
CASC4-202ENST00000345795 ATG4AQ8WYN0 398 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 BAP1Q92560 729 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 IRF6O14896 467 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 CLDN3O15551 220 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 SART1O43290 800 aaKnown RBP14.34□□□□□ -0.11
CASC4-202ENST00000345795 PSMD10O75832 226 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 KIAA0754O94854 1291 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 PPP2R5DQ14738 602 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 TREML2Q5T2D2 321 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 APEX2Q9UBZ4 518 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 AMHR2Q16671 573 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
CASC4-202ENST00000345795 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.11
CASC4-202ENST00000345795 E7EVH7 732 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 MYO1FO00160 1098 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 PIAS1O75925 651 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 CCNE2O96020 404 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 BEND6Q5SZJ8 279 aaPredicted RBP14.33□□□□□ -0.11
CASC4-202ENST00000345795 C1orf186Q6ZWK4 172 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 KIFAP3Q92845 792 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 NUP85Q9BW27 656 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 ZWILCHQ9H900 591 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.11
CASC4-202ENST00000345795 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.11
CASC4-202ENST00000345795 PSMC4P43686 418 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 KCNJ6P48051 423 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 MARCKSL1P49006 195 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 CLK2P49760 499 aaKnown RBP14.33□□□□□ -0.12
CASC4-202ENST00000345795 CALCOCO2Q13137 446 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 TMEM132BQ14DG7 1078 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 CCDC26Q8TAB7 109 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 NLRP7Q8WX94 980 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 HSD17B14Q9BPX1 270 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 TMEM206Q9H813 350 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 PXMP2Q9NR77 195 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
CASC4-202ENST00000345795 NOL4O94818 638 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 INTS8Q75QN2 995 aaKnown RBP14.33□□□□□ -0.12
CASC4-202ENST00000345795 PRUNE1Q86TP1 453 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 MICALL1Q8N3F8 863 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
CASC4-202ENST00000345795 TUFT1Q9NNX1 390 aa14.33□□□□□ -0.12
CASC4-202ENST00000345795 GRID2IPA4D2P6 1211 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.121e-16■■■■■ 46.1
CASC4-202ENST00000345795 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 PTPRAP18433 802 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 MFAP3P55082 362 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 LACTBP83111 547 aaPredicted RBP14.32□□□□□ -0.12
CASC4-202ENST00000345795 SMTNL2Q2TAL5 461 aa14.32□□□□□ -0.12
CASC4-202ENST00000345795 GLRA4Q5JXX5 417 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms