RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRPF31Q8WWY3 499 aaKnown RBP13.85□□□□□ -0.19
SGCA-202ENST00000344627 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 EIF2AK1Q9BQI3 630 aaKnown RBP13.85□□□□□ -0.19
SGCA-202ENST00000344627 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
SGCA-202ENST00000344627 UBN1Q9NPG3 1134 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 DPP7Q9UHL4 492 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 SSX2IPQ9Y2D8 614 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
SGCA-202ENST00000344627 C2orf71A6NGG8 1288 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 MCM7P33993 719 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 BCAR1P56945 870 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 LAMTOR4Q0VGL1 99 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 EMC2Q15006 297 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 CLLU1OSQ5K130 101 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 ELMSAN1Q6PJG2 1045 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 SRGAP1Q7Z6B7 1085 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 DDX53Q86TM3 631 aaKnown RBP13.84□□□□□ -0.19
SGCA-202ENST00000344627 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 VN1R2Q8NFZ6 395 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 LPPQ93052 612 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 DHX33Q9H6R0 707 aaKnown RBP13.84□□□□□ -0.19
SGCA-202ENST00000344627 SORCS3Q9UPU3 1222 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 INPP5FQ9Y2H2 1132 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 CNTNAP2Q9UHC6 1331 aa13.84□□□□□ -0.19
SGCA-202ENST00000344627 HIDE1A8MVS5 230 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 SLITRK3O94933 977 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 CXCL14O95715 111 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 C1RP00736 705 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 CTSAP10619 480 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 RNASELQ05823 741 aaKnown RBP13.83□□□□□ -0.2
SGCA-202ENST00000344627 MTMR3Q13615 1198 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 NOMO2Q5JPE7 1267 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 CYP26C1Q6V0L0 522 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 ZBTB33Q86T24 672 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 RNF149Q8NC42 400 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 URGCPQ8TCY9 931 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 ZSCAN31Q96LW9 406 aaPredicted RBP13.83□□□□□ -0.2
SGCA-202ENST00000344627 MTRQ99707 1265 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 MUC6Q6W4X9 2439 aa13.83□□□□□ -0.2
SGCA-202ENST00000344627 A0A087WWV3 80 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 NT5C1B-RDH14C9J2C7 533 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 WNT7AO00755 349 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
SGCA-202ENST00000344627 ST3GAL1Q11201 340 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 EMILIN2Q9BXX0 1053 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 ZBP1Q9H171 429 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 IFT122Q9HBG6 1241 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
SGCA-202ENST00000344627 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
SGCA-202ENST00000344627 ZC3H11AO75152 810 aaKnown RBP eCLIP13.81□□□□□ -0.2
SGCA-202ENST00000344627 ERLIN2O94905 339 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 ALDH2P05091 517 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 AVPR2P30518 371 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 AXLP30530 894 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 ZNF174Q15697 407 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 MRPL10Q7Z7H8 261 aaKnown RBP13.81□□□□□ -0.2
SGCA-202ENST00000344627 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 VPS52Q8N1B4 723 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
SGCA-202ENST00000344627 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 LLPHQ9BRT6 129 aaKnown RBP13.81□□□□□ -0.2
SGCA-202ENST00000344627 RHOBTB2Q9BYZ6 727 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 TMEM60Q9H2L4 133 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 MINDY3Q9H8M7 445 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 SH2B1Q9NRF2 756 aaPredicted RBP13.81□□□□□ -0.2
SGCA-202ENST00000344627 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 PCDHB2Q9Y5E7 798 aa13.81□□□□□ -0.2
SGCA-202ENST00000344627 POTEMA6NI47 508 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 INO80B-WBP1J3KQ70 363 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 ST18O60284 1047 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 OFD1O75665 1012 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 GALTP07902 379 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 TFDP1Q14186 410 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 C15orf39Q6ZRI6 1047 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 HACE1Q8IYU2 909 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
SGCA-202ENST00000344627 MTMR9Q96QG7 549 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms