RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 DENND2CQ68D51 928 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 CTAGE3PQ8IX95 158 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 RHOT2Q8IXI1 618 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 FAM76AQ8TAV0 307 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 SLC38A7Q9NVC3 462 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 CALB1P05937 261 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 EIF4A3P38919 411 aaKnown RBP17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 OAZ1P54368 228 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 VGLL2Q8N8G2 317 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 TNIP3Q96KP6 325 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 SETD4Q9NVD3 440 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 PRMT7Q9NVM4 692 aaPredicted RBP17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 SLIT3O75094 1523 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 KRT15P19012 456 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 GRK4P32298 578 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 DNERQ8NFT8 737 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 TINF2Q9BSI4 451 aa17.58■□□□□ 0.4
SMARCA4-201ENST00000344626 SKIP12755 728 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 KLRC1P26715 233 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 MUM1L1Q5H9M0 696 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 LMBRD2Q68DH5 695 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 FBF1Q8TES7 1133 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 NHEJ1Q9H9Q4 299 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 HOMER3Q9NSC5 361 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 EVI5O60447 810 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 FSCN1Q16658 493 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 ZNF449Q6P9G9 518 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 CCDC110Q8TBZ0 833 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 PDE4DIPQ5VU43 2346 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 LGALS16A8MUM7 142 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 HSPA6P17066 643 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 NMT1P30419 496 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 FYB2Q5VWT5 728 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 GAKO14976 1311 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 SNRPFP62306 86 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 SETDB1Q15047 1291 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 DLK2Q6UY11 383 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 PANX2Q96RD6 677 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 TTC1Q99614 292 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 SYNPO2Q9UMS6 1093 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 ACOT2P49753 483 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.45e-7■■■■□ 19.6
SMARCA4-201ENST00000344626 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 SPRYD7Q5W111 196 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 SHC4Q6S5L8 630 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 CDKL2Q92772 493 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 ADAM22Q9P0K1 906 aa17.57■□□□□ 0.4
SMARCA4-201ENST00000344626 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 GPR182O15218 404 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 RPA1P27694 616 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 NDUFAF2Q8N183 169 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 BPIFA3Q9BQP9 254 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 CALN1Q9BXU9 219 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 GOLPH3LQ9H4A5 285 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 NOC2LQ9Y3T9 749 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 POLR3CQ9BUI4 534 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 PXMP2Q9NR77 195 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 DDX41Q9UJV9 622 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 UBE4BO95155 1302 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 SGK1O00141 431 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 CD4P01730 458 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 RBP5P82980 135 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 STAP1Q9ULZ2 295 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 AGAP1Q9UPQ3 857 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 DAAM1Q9Y4D1 1078 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 SNX9Q9Y5X1 595 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 BTBD19C9JJ37 291 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 HEXIM1O94992 359 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 HOXC6P09630 235 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 PSMA2P25787 234 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 RECQLP46063 649 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 HHATQ5VTY9 493 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 LRRC31Q6UY01 552 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 FBXL13Q8NEE6 735 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 C7orf25Q9BPX7 421 aa17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 FNDC3AQ9Y2H6 1198 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-201ENST00000344626 SPDYE5A6NIY4 337 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 ETF1P62495 437 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 MAP2K5Q13163 448 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 ALKBH5Q6P6C2 394 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 ASNSD1Q9NWL6 643 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 MYO9BQ13459 2157 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 TRIM49BA6NDI0 452 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 WDR72Q3MJ13 1102 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms