RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
RTN1-202ENST00000342503 V9GYY5 206 aaPredicted RBP21.76■■□□□ 1.07
RTN1-202ENST00000342503 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
RTN1-202ENST00000342503 STRNO43815 780 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 GCLMP48507 274 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 RBM10P98175 930 aaKnown RBP21.75■■□□□ 1.07
RTN1-202ENST00000342503 TAPT1Q6NXT6 567 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 ZNF710Q8N1W2 664 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 LMO3Q8TAP4 145 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 DEPTORQ8TB45 409 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 CARD6Q9BX69 1037 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 DNAJC12Q9UKB3 198 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 PPME1Q9Y570 386 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 LRRIQ4A6NIV6 560 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 P4HA2O15460 535 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 GARTP22102 1010 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 PLCB4Q15147 1175 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 GPR142Q7Z601 462 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 ATP8B4Q8TF62 1192 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 KCNN1Q92952 543 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 FBXL18Q96ME1 805 aa21.75■■□□□ 1.07
RTN1-202ENST00000342503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.75■■□□□ 1.07
RTN1-202ENST00000342503 PJA2O43164 708 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 PRKCIP41743 596 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 STRN3Q13033 797 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 SLC18A3Q16572 532 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 EPC2Q52LR7 807 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 MFSD14AQ96MC6 490 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 STK33Q9BYT3 514 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 VTA1Q9NP79 307 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 APEX2Q9UBZ4 518 aa21.74■■□□□ 1.07
RTN1-202ENST00000342503 BZW2Q9Y6E2 419 aaKnown RBP21.74■■□□□ 1.07
RTN1-202ENST00000342503 MACROD2A1Z1Q3 448 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 SCP2P22307 547 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 STAT1P42224 750 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 LIG4P49917 911 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 PTK2Q05397 1052 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 ARHGAP1Q07960 439 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 CETN1Q12798 172 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 DRP2Q13474 957 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 ZNF571Q7Z3V5 609 aaPredicted RBP21.73■■□□□ 1.07
RTN1-202ENST00000342503 ZNF467Q7Z7K2 595 aaPredicted RBP21.73■■□□□ 1.07
RTN1-202ENST00000342503 GPD1LQ8N335 351 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 MNS1Q8NEH6 495 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 SECISBP2LQ93073 1101 aaKnown RBP21.73■■□□□ 1.07
RTN1-202ENST00000342503 SMARCAD1Q9H4L7 1026 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 USP20Q9Y2K6 914 aa21.73■■□□□ 1.07
RTN1-202ENST00000342503 A0A087X0T9 212 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 ZBTB42B2RXF5 422 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 ITGBL1O95965 494 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 FAM228BP0C875 321 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 PNMA6AP0CW24 399 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 FERP16591 822 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 HUNKP57058 714 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 CAPSQ13938 189 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 FAM110CQ1W6H9 321 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 PHLDB3Q6NSJ2 640 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 ANKRD7Q92527 254 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 TMEM117Q9H0C3 514 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 DAAM1Q9Y4D1 1078 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 RBM47A0AV96 593 aaKnown RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 LRRIQ3A6PVS8 624 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 F8VZ95 297 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 K7ERI5 159 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 PMM2O15305 246 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 GFPT2O94808 682 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 SOX5P35711 763 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 MXI1P50539 228 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 CYP24A1Q07973 514 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 GRB14Q14449 540 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 DRAP1Q14919 205 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 GJC2Q5T442 439 aaPredicted RBP21.72■■□□□ 1.07
RTN1-202ENST00000342503 MAMDC4Q6UXC1 1216 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 DPP9Q86TI2 863 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 TXLNBQ8N3L3 684 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 TMC2Q8TDI7 906 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 PARD3BQ8TEW8 1205 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 CCDC127Q96BQ5 260 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 GPR88Q9GZN0 384 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 KATNBL1Q9H079 304 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 TMEM134Q9H6X4 195 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 ADAMTS1Q9UHI8 967 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 CDC23Q9UJX2 597 aa21.72■■□□□ 1.07
RTN1-202ENST00000342503 TULP1O00294 542 aaPredicted RBP21.71■■□□□ 1.07
RTN1-202ENST00000342503 PIGRP01833 764 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 LAMC2Q13753 1193 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 TUBB2AQ13885 445 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 IER5Q5VY09 327 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 PLEKHH3Q7Z736 793 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 PRPF31Q8WWY3 499 aaKnown RBP21.71■■□□□ 1.07
RTN1-202ENST00000342503 FAM213AQ9BRX8 229 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 TUBB2BQ9BVA1 445 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 STYXL1Q9Y6J8 313 aa21.71■■□□□ 1.07
RTN1-202ENST00000342503 ADCY3O60266 1144 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 LRRN2O75325 713 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 SNAI1O95863 264 aaPredicted RBP21.7■■□□□ 1.06
RTN1-202ENST00000342503 GH1P01241 217 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 SLC26A2P50443 739 aa21.7■■□□□ 1.06
RTN1-202ENST00000342503 MKRN4PQ13434 485 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms