RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 FAM84AQ96KN4 292 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 AGPAT1Q99943 283 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 DBR1Q9UK59 544 aaKnown RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 PHF20L1A8MW92 1017 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 TISP43B9A030 160 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 AMIGO3Q86WK7 504 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 RTKN2Q8IZC4 609 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 RUNDC3BQ96NL0 473 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 TAAR1Q96RJ0 339 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 HEY1Q9Y5J3 304 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 PDE2AO00408 941 aaPredicted RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 PPP2R5AQ15172 486 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 FBXW10Q5XX13 1052 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ERICH1Q86X53 443 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 DCLK2Q8N568 766 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 RSRC1Q96IZ7 334 aaKnown RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 FEM1BQ9UK73 627 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 NT5DC1Q5TFE4 455 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ATG4CQ96DT6 458 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ACP6Q9NPH0 428 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 PNMA2Q9UL42 364 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ALG6Q9Y672 507 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 CASP5P51878 434 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SLC15A2Q16348 729 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 FBXL13Q8NEE6 735 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
CDH5-201ENST00000341529 VCPKMTQ9H867 229 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SMYD2Q9NRG4 433 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 INTUQ9ULD6 942 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 NFIBO00712 420 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SPAG7O75391 227 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SUN1O94901 812 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 GLI1P08151 1106 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ITGA4P13612 1032 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SCP2P22307 547 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 PMS2P54278 862 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 PSMC5P62195 406 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 DPY19L2Q6NUT2 758 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 SH3RF1Q7Z6J0 888 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 ATP6V1G3Q96LB4 118 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
CDH5-201ENST00000341529 DCCP43146 1447 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 GOLGA8RI6L899 631 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 INHBAP08476 426 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 PSMA2P25787 234 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 PON1P27169 355 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 FUT2Q10981 343 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 GIT2Q14161 759 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 FAM160B1Q5W0V3 765 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 ZNF571Q7Z3V5 609 aaPredicted RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 CROCCP2Q86T23 111 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 EFCAB13Q8IY85 973 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 ZKSCAN4Q969J2 545 aaPredicted RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 RBAKQ9NYW8 714 aaPredicted RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 HERC5Q9UII4 1024 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 PCDHA10Q9Y5I2 948 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 KNDC1Q76NI1 1749 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 COMTP21964 271 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 IRAK1P51617 712 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 NAB2Q15742 525 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 GLE1Q53GS7 698 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 FOXR1Q6PIV2 292 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 ATP6V0A4Q9HBG4 840 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 H0Y3Z8 333 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 I3L4J1 428 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 EML1O00423 815 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 TXNDC9O14530 226 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 BAG2O95816 211 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 NR3C2P08235 984 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 GNA15P30679 374 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 MAP2K2P36507 400 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 NBPF9Q3BBW0 867 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms